3,095 research outputs found
LEGaTO: first steps towards energy-efficient toolset for heterogeneous computing
LEGaTO is a three-year EU H2020 project which started in December 2017. The LEGaTO project will leverage task-based programming models to provide a software ecosystem for Made-in-Europe heterogeneous hardware composed of CPUs, GPUs, FPGAs and dataflow engines. The aim is to attain one order of magnitude energy savings from the edge to the converged cloud/HPC.Peer ReviewedPostprint (author's final draft
A Scalable Correlator Architecture Based on Modular FPGA Hardware, Reuseable Gateware, and Data Packetization
A new generation of radio telescopes is achieving unprecedented levels of
sensitivity and resolution, as well as increased agility and field-of-view, by
employing high-performance digital signal processing hardware to phase and
correlate large numbers of antennas. The computational demands of these imaging
systems scale in proportion to BMN^2, where B is the signal bandwidth, M is the
number of independent beams, and N is the number of antennas. The
specifications of many new arrays lead to demands in excess of tens of PetaOps
per second.
To meet this challenge, we have developed a general purpose correlator
architecture using standard 10-Gbit Ethernet switches to pass data between
flexible hardware modules containing Field Programmable Gate Array (FPGA)
chips. These chips are programmed using open-source signal processing libraries
we have developed to be flexible, scalable, and chip-independent. This work
reduces the time and cost of implementing a wide range of signal processing
systems, with correlators foremost among them,and facilitates upgrading to new
generations of processing technology. We present several correlator
deployments, including a 16-antenna, 200-MHz bandwidth, 4-bit, full Stokes
parameter application deployed on the Precision Array for Probing the Epoch of
Reionization.Comment: Accepted to Publications of the Astronomy Society of the Pacific. 31
pages. v2: corrected typo, v3: corrected Fig. 1
Disaggregating non-volatile memory for throughput-oriented genomics workloads
Massive exploitation of next-generation sequencing technologies requires dealing with both: huge amounts of data and complex bioinformatics pipelines. Computing architectures have evolved to deal with these problems, enabling approaches that were unfeasible years ago: accelerators and Non-Volatile Memories (NVM) are becoming widely used to enhance the most demanding workloads. However, bioinformatics workloads are usually part of bigger pipelines with different and dynamic needs in terms of resources. The introduction of Software Defined Infrastructures (SDI) for data centers provides roots to dramatically increase the efficiency in the management of infrastructures. SDI enables new ways to structure hardware resources through disaggregation, and provides new hardware composability and sharing mechanisms to deploy workloads in more flexible ways. In this paper we study a state-of-the-art genomics application, SMUFIN, aiming to address the challenges of future HPC facilities.This work is partially supported by the European Research Council (ERC) under the EU Horizon 2020 programme (GA 639595), the Spanish Ministry of Economy, Industry and Competitivity (TIN2015-65316-P) and the Generalitat de Catalunya (2014-SGR-1051).Peer ReviewedPostprint (author's final draft
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