Deep Multilevel Graph Partitioning

Partitioning a graph into blocks of "roughly equal" weight while cutting only few edges is a fundamental problem in computer science with a wide range of applications. In particular, the problem is a building block in applications that require parallel processing. While the amount of available cores in parallel architectures has significantly increased in recent years, state-of-the-art graph partitioning algorithms do not work well if the input needs to be partitioned into a large number of blocks. Often currently available algorithms compute highly imbalanced solutions, solutions of low quality, or have excessive running time for this case. This is due to the fact that most high-quality general-purpose graph partitioners are multilevel algorithms which perform graph coarsening to build a hierarchy of graphs, initial partitioning to compute an initial solution, and local improvement to improve the solution throughout the hierarchy. However, for large number of blocks, the smallest graph in the hierarchy that is used for initial partitioning still has to be large. In this work, we substantially mitigate these problems by introducing deep multilevel graph partitioning and a shared-memory implementation thereof. Our scheme continues the multilevel approach deep into initial partitioning - integrating it into a framework where recursive bipartitioning and direct k-way partitioning are combined such that they can operate with high performance and quality. Our integrated approach is stronger, more flexible, arguably more elegant, and reduces bottlenecks for parallelization compared to existing multilevel approaches. For example, for large number of blocks our algorithm is on average at least an order of magnitude faster than competing algorithms while computing partitions with comparable solution quality. At the same time, our algorithm consistently produces balanced solutions. Moreover, for small number of blocks, our algorithms are the fastest among competing systems with comparable quality

Jet: Multilevel Graph Partitioning on GPUs

The multilevel heuristic is the dominant strategy for high-quality sequential and parallel graph partitioning. Partition refinement is a key step of multilevel graph partitioning. In this work, we present Jet, a new parallel algorithm for partition refinement specifically designed for Graphics Processing Units (GPUs). We combine Jet with GPU-aware coarsening to develop a $k$-way graph partitioner. The new partitioner achieves superior quality when compared to state-of-the-art shared memory graph partitioners on a large collection of test graphs.Comment: Submitted as a non-archival track paper for SIAM ACDA 202

JOSTLE: multilevel graph partitioning software: an overview

In this chapter we look at JOSTLE, the multilevel graph-partitioning software package, and highlight some of the key research issues that it addresses. We first outline the core algorithms and place it in the context of the multilevel refinement paradigm. We then look at issues relating to its use as a tool for parallel processing and, in particular, partitioning in parallel. Since its first release in 1995, JOSTLE has been used for many mesh-based parallel scientific computing applications and so we also outline some enhancements such as multiphase mesh-partitioning, heterogeneous mapping and partitioning to optimise subdomain shap

An effective data placement strategy for XML documents

As XML is increasingly being used in Web applications, new technologies need to be investigated for processing XML documents with high performance. Parallelism is a promising solution for structured document processing and data placement is a major factor for system performance improvement in parallel processing. This paper describes an effective XML document data placement strategy. The new strategy is based on a multilevel graph partitioning algorithm with the consideration of the unique features of XML documents and query distributions. A new algorithm, which is based on XML query schemas to derive the weighted graph from the labelled directed graph presentation of XML documents, is also proposed. Performance analysis on the algorithm presented in the paper shows that the new data placement strategy exhibits low workload skew and a high degree of parallelism

Parallel Graph Partitioning for Complex Networks

Processing large complex networks like social networks or web graphs has recently attracted considerable interest. In order to do this in parallel, we need to partition them into pieces of about equal size. Unfortunately, previous parallel graph partitioners originally developed for more regular mesh-like networks do not work well for these networks. This paper addresses this problem by parallelizing and adapting the label propagation technique originally developed for graph clustering. By introducing size constraints, label propagation becomes applicable for both the coarsening and the refinement phase of multilevel graph partitioning. We obtain very high quality by applying a highly parallel evolutionary algorithm to the coarsened graph. The resulting system is both more scalable and achieves higher quality than state-of-the-art systems like ParMetis or PT-Scotch. For large complex networks the performance differences are very big. For example, our algorithm can partition a web graph with 3.3 billion edges in less than sixteen seconds using 512 cores of a high performance cluster while producing a high quality partition -- none of the competing systems can handle this graph on our system.Comment: Review article. Parallelization of our previous approach arXiv:1402.328

Tree-based Coarsening and Partitioning of Complex Networks

Many applications produce massive complex networks whose analysis would benefit from parallel processing. Parallel algorithms, in turn, often require a suitable network partition. For solving optimization tasks such as graph partitioning on large networks, multilevel methods are preferred in practice. Yet, complex networks pose challenges to established multilevel algorithms, in particular to their coarsening phase. One way to specify a (recursive) coarsening of a graph is to rate its edges and then contract the edges as prioritized by the rating. In this paper we (i) define weights for the edges of a network that express the edges' importance for connectivity, (ii) compute a minimum weight spanning tree $T^m$ with respect to these weights, and (iii) rate the network edges based on the conductance values of $T^m$'s fundamental cuts. To this end, we also (iv) develop the first optimal linear-time algorithm to compute the conductance values of \emph{all} fundamental cuts of a given spanning tree. We integrate the new edge rating into a leading multilevel graph partitioner and equip the latter with a new greedy postprocessing for optimizing the maximum communication volume (MCV). Experiments on bipartitioning frequently used benchmark networks show that the postprocessing already reduces MCV by 11.3%. Our new edge rating further reduces MCV by 10.3% compared to the previously best rating with the postprocessing in place for both ratings. In total, with a modest increase in running time, our new approach reduces the MCV of complex network partitions by 20.4%