Computer-assisted transcription and analysis of speech

The two papers included in this volume have developed from work with the CHILDES tools and the Media Editor in the two research projects, "Second language acquisition of German by Russian learners", sponsored by the Max Planck Institute for Psycholinguistics, Nijmegen, from 1998 to 1999 (directed by Ursula Stephany, University of Cologne, and Wolfgang Klein, Max Planck Institute for Psycholinguistics, Nijmegen) and "The age factor in the acquisition of German as a second language", sponsored by the German Science Foundation (DFG), Bonn, since 2000 (directed by Ursula Stephany, University of Cologne, and Christine Dimroth, Max Planck Institute for Psycholinguistics, Nijmegen). The CHILDES Project has been developed and is being continuously improved at Carnegie Mellon University, Pittsburgh, under the supervision of Brian MacWhinney. Having used the CHILDES tools for more than ten years for transcribing and analyzing Greek child data there it was no question that I would also use them for research into the acquisition of German as a second language and analyze the big amount of spontaneous speech gathered from two Russian girls with the help of the CLAN programs. When in the spring of 1997, Steven Gillis from the University of Antwerp (in collaboration with Gert Durieux) developed a lexicon-based automatic coding system based on the CLAN program MOR and suitable for coding languages with richer morphologies than English, such as Modern Greek. Coding huge amounts of data then became much quicker and more comfortable so that I decided to adopt this system for German as well. The paper "Working with the CHILDES Tools" is based on two earlier manuscripts which have grown out of my research on Greek child language and the many CHILDES workshops taught in Germany, Greece, Portugal, and Brazil over the years. Its contents have now been adapted to the requirements of research into the acquisition of German as a second language and for use on Windows

A Unified approach to concurrent and parallel algorithms on balanced data structures

Concurrent and parallel algorithms are different. However, in the case of dictionaries, both kinds of algorithms share many common points. We present a unified approach emphasizing these points. It is based on a careful analysis of the sequential algorithm, extracting from it the more basic facts, encapsulated later on as local rules. We apply the method to the insertion algorithms in AVL trees. All the concurrent and parallel insertion algorithms have two main phases. A percolation phase, moving the keys to be inserted down, and a rebalancing phase. Finally, some other algorithms and balanced structures are discussed.Postprint (published version

GraphTool : a tool for interactive design and manipulation of graphs and graph algorithms

GraphTool is an interactive tool for editing graphs and visualizing the execution and results of graph algorithms. It runs under both the SunView and X Windows environments and has a full window/mouse interface which is as similar as possible for the two windowing systems. In addition, there is a standalone program called the Wrapper which simulates the Graph-Tool interface without graphics for batch processing of graph algorithms. While the primary purpose of GraphTool is to provide a means for experimentally investigating the performance of graph algorithms, it has other useful features as well. It provides features for printing graphs in a visually appealing format, which makes it easier to prepare papers for publication. It also provides a facility for "animating" algorithms, which means that it can be used in computer assisted instruction (CAI) and for preparing video presentations of algorithms

Implementation and complexity of the watershed-from-markers algorithm computed as a minimal cost forest

The watershed algorithm belongs to classical algorithms in mathematical morphology. Lotufo et al. published a principle of the watershed computation by means of an Image Foresting Transform (IFT), which computes a shortest path forest from given markers. The algorithm itself was described for a 2D case (image) without a detailed discussion of its computation and memory demands for real datasets. As IFT cleverly solves the problem of plateaus and as it gives precise results when thin objects have to be segmented, it is obvious to use this algorithm for 3D datasets taking in mind the minimizing of a higher memory consumption for the 3D case without loosing low asymptotical time complexity of O(m+C) (and also the real computation speed). The main goal of this paper is an implementation of the IFT algorithm with a priority queue with buckets and careful tuning of this implementation to reach as minimal memory consumption as possible. The paper presents five possible modifications and methods of implementation of the IFT algorithm. All presented implementations keep the time complexity of the standard priority queue with buckets but the best one minimizes the costly memory allocation and needs only 19-45% of memory for typical 3D medical imaging datasets. Memory saving was reached by an IFT algorithm simplification, which stores more elements in temporary structures but these elements are simpler and thus need less memory. The best presented modification allows segmentation of large 3D medical datasets (up to 512x512x680 voxels) with 12-or 16-bits per voxel on currently available PC based workstations.Comment: v1: 10 pages, 6 figures, 7 tables EUROGRAPHICS conference, Manchester, UK, 2001. v2: 12 pages, reformated for letter, corrected IFT to "Image Foresting Tranform

Non-blocking Priority Queue based on Skiplists with Relaxed Semantics

Priority queues are data structures that store information in an orderly fashion. They are of tremendous importance because they are an integral part of many applications, like Dijkstra’s shortest path algorithm, MST algorithms, priority schedulers, and so on. Since priority queues by nature have high contention on the delete_min operation, the design of an efficient priority queue should involve an intelligent choice of the data structure as well as relaxation bounds on the data structure. Lock-free data structures provide higher scalability as well as progress guarantee than a lock-based data structure. That is another factor to be considered in the priority queue design. We present a relaxed non-blocking priority queue based on skiplists. We address all the design issues mentioned above in our priority queue. Use of skiplists allows multiple threads to concurrently access different parts of the skiplist quickly, whereas relaxing the priority queue delete_min operation distributes contention over the skiplist instead of just at the front. Furthermore, a non-blocking implementation guarantees that the system will make progress even when some process fails. Our priority queue is internally composed of several priority queues, one for each thread and one shared priority queue common to all threads. Each thread selects the best value from its local priority queue and the shared priority queue and returns the value. In case a thread is unable to delete an item, it tries to spy items from other threads\u27 local priority queues. We experimentally and theoretically show the correctness of our data structure. We also compare the performance of our data structure with other variations like priority queues based on coarse-grained skiplists for both relaxed and non-relaxed semantics