Parallel Methods for Mining Frequent Sequential patterns

The explosive growth of data and the rapid progress of technology have led to a huge amount of data that is collected every day. In that data volume contains much valuable information. Data mining is the emerging field of applying statistical and artificial intelligence techniques to the problem of finding novel, useful and non-trivial patterns from large databases. It is the task of discovering interesting patterns from large amounts of data. This is achieved by determining both implicit and explicit unidentified patterns in data that can direct the process of decision making. There are many data mining tasks, such as classification, clustering, association rule mining and sequential pattern mining. In that, sequential pattern mining is an important problem in data mining. It provides an effective way to analyze the sequence data. The goal of sequential pattern mining is to discover interesting, unexpected and useful patterns from sequence databases. This task is used in many wide applications such as financial data analysis of banks, retail industry, customer shopping history, goods transportation, consumption and services, telecommunication industry, biological data analysis, scientific applications, network intrusion detection, scientific research, etc. Different types of sequential pattern mining can be performed, they are sequential patterns, maximal sequential patterns, closed sequences, constraint based and time interval based sequential patterns. Sequential pattern mining refers to the identification of frequent subsequences in sequence databases as patterns. In the last two decades, researchers have proposed many techniques and algorithms for extracting the frequent sequential patterns, in which the downward closure property plays a fundamental role. Sequential pattern is a sequence of itemsets that frequently occur in a specific order, where all items in the same itemsets are supposed to have the same transaction time value. One of the challenges for sequential pattern mining is the computational costs beside that is the potentially huge number of extracted patterns. In this thesis, we present an overview of the work done for sequential pattern mining and develop parallel methods for mining frequent sequential patterns in sequence databases that can tackle emerging data processing workloads while coping with larger and larger scales.The explosive growth of data and the rapid progress of technology have led to a huge amount of data that is collected every day. In that data volume contains much valuable information. Data mining is the emerging field of applying statistical and artificial intelligence techniques to the problem of finding novel, useful and non-trivial patterns from large databases. It is the task of discovering interesting patterns from large amounts of data. This is achieved by determining both implicit and explicit unidentified patterns in data that can direct the process of decision making. There are many data mining tasks, such as classification, clustering, association rule mining and sequential pattern mining. In that, sequential pattern mining is an important problem in data mining. It provides an effective way to analyze the sequence data. The goal of sequential pattern mining is to discover interesting, unexpected and useful patterns from sequence databases. This task is used in many wide applications such as financial data analysis of banks, retail industry, customer shopping history, goods transportation, consumption and services, telecommunication industry, biological data analysis, scientific applications, network intrusion detection, scientific research, etc. Different types of sequential pattern mining can be performed, they are sequential patterns, maximal sequential patterns, closed sequences, constraint based and time interval based sequential patterns. Sequential pattern mining refers to the identification of frequent subsequences in sequence databases as patterns. In the last two decades, researchers have proposed many techniques and algorithms for extracting the frequent sequential patterns, in which the downward closure property plays a fundamental role. Sequential pattern is a sequence of itemsets that frequently occur in a specific order, where all items in the same itemsets are supposed to have the same transaction time value. One of the challenges for sequential pattern mining is the computational costs beside that is the potentially huge number of extracted patterns. In this thesis, we present an overview of the work done for sequential pattern mining and develop parallel methods for mining frequent sequential patterns in sequence databases that can tackle emerging data processing workloads while coping with larger and larger scales.460 - Katedra informatikyvyhově

Constraint-based Sequential Pattern Mining with Decision Diagrams

Constrained sequential pattern mining aims at identifying frequent patterns on a sequential database of items while observing constraints defined over the item attributes. We introduce novel techniques for constraint-based sequential pattern mining that rely on a multi-valued decision diagram representation of the database. Specifically, our representation can accommodate multiple item attributes and various constraint types, including a number of non-monotone constraints. To evaluate the applicability of our approach, we develop an MDD-based prefix-projection algorithm and compare its performance against a typical generate-and-check variant, as well as a state-of-the-art constraint-based sequential pattern mining algorithm. Results show that our approach is competitive with or superior to these other methods in terms of scalability and efficiency.Comment: AAAI201

Mining high utility sequential patterns

University of Technology Sydney. Faculty of Engineering and Information Technology.Sequential pattern mining refers to the identification of frequent subsequences in sequence databases as patterns. It provides an effective way to analyze the sequential data. The selection of interesting sequences is generally based on the frequency/support framework: sequences of high frequency are treated as significant. In the last two decades, researchers have proposed many techniques and algorithms for extracting the frequent sequential patterns, in which the downward closure property (also known as Apriori property) plays a fundamental role. At the same time, the relative importance of each item has been introduced in frequent pattern mining, and “high utility itemset mining” has been proposed. Instead of selecting high frequency patterns, the utility-based methods extract itemsets with high utilities, and many algorithms and strategies have been proposed. These methods can only process the itemsets in the utility framework. However, all the above methods suffer from the following common issues and problems to varying extents: 1) Sometimes, most of frequent patterns may not be informative to business decision-making, since they do not show the business value and impact. 2) Even if there is an algorithm that considers the business impact (namely utility), it can only obtain high utility sequences based on a given minimum utility threshold, thus it is very difficult for users to specify an appropriate minimum utility and to directly obtain the most valuable patterns. 3) The algorithm in the utility framework may generate a large number of patterns, many of which maybe redundant. Although high utility sequential pattern mining is essential, discovering the patterns is challenging for the following reasons: 1) The downward closure property does not hold in utility-based sequence mining. This means that most of the existing algorithms cannot be directly transferred, e.g. from frequent sequential pattern mining to high utility sequential pattern mining. Furthermore, compared to high utility itemset mining, utility-based sequence analysis faces the critical combinational explosion and computational complexity caused by sequencing between sequential elements (itemsets). 2) Since the minimum utility is not given in advance, the algorithm essentially starts searching from 0 minimum support. This not only incurs very high computational costs, but also the challenge of how to raise the minimum threshold without missing any top-k high utility sequences. 3) Due to the fundamental difference, incorporating the traditional closure concept into high utility sequential pattern mining makes the outcome patterns irreversibly lossy and no longer recoverable, which will be reasoned in the following chapters. Therefore, it is exceedingly challenging to address the above issues by designing a novel representation for high utility sequential patterns. To address these research limitations and challenges, this thesis proposes a high utility sequential pattern mining framework, and proposes both a threshold-based and top-k-based mining algorithm. Furthermore, a compact and lossless representation of utility-based sequence is presented, and an efficient algorithm is provided to mine such kind of patterns. Chapter 2 thoroughly reviews the related works in the frequent sequential pattern mining and high utility itemset/sequence mining. Chapter 3 incorporates utility into sequential pattern mining, and a generic framework for high utility sequence mining is defined. Two efficient algorithms, namely USpan and USpan+, are presented to mine for high utility sequential patterns. In USpan and USpan+, we introduce the lexicographic quantitative sequence tree to extract the complete set of high utility sequences and design concatenation mechanisms for calculating the utility of a node and its children with three effective pruning strategies. Chapter 4 proposes a novel framework called top-k high utility sequential pattern mining to tackle this critical problem. Accordingly, an efficient algorithm, Top-k high Utility Sequence (TUS for short) mining, is designed to identify top-k high utility sequential patterns without minimum utility. In addition, three effective features are introduced to handle the efficiency problem, including two strategies for raising the threshold and one pruning for filtering unpromising items. Chapter 5 proposes a novel concise framework to discover US-closed (Utility Sequence closed) high utility sequential patterns, with theoretical proof that it expresses the lossless representation of high-utility patterns. An efficient algorithm named CloUSpan is introduced to extract the US-closed patterns. Two effective strategies are used to enhance the performance of CloUSpan. All of the algorithms are examined in both synthetic and real datasets. The performances, including the running time and memory consumption, are compared. Furthermore, the utility-based sequential patterns are compared with the patterns in the frequency/support framework. The results show that high utility sequential patterns provide insightful knowledge for users

Automatic pattern-taxonomy extraction for web mining

In this paper, we propose a model for discovering frequent sequential patterns, phrases, which can be used as profile descriptors of documents. It is indubitable that we can obtain numerous phrases using data mining algorithms. However, it is difficult to use these phrases effectively for answering what users want. Therefore, we present a pattern taxonomy extraction model which performs the task of extracting descriptive frequent sequential patterns by pruning the meaningless ones. The model then is extended and tested by applying it to the information filtering system. The results of the experiment show that pattern-based methods outperform the keyword-based methods. The results also indicate that removal of meaningless patterns not only reduces the cost of computation but also improves the effectiveness of the system. <br /

Sequential Pattern Mining with Multidimensional Interval Items

In real sequence pattern mining scenarios, the interval information between two item sets is very important. However, although existing algorithms can effectively mine frequent subsequence sets, the interval information is ignored. This paper aims to mine sequential patterns with multidimensional interval items in sequence databases. In order to address this problem, this paper defines and specifies the interval event problem in the sequential pattern mining task. Then, the interval event items framework is proposed to handle the multidimensional interval event items. Moreover, the MII-Prefixspan algorithm is introduced for the sequential pattern with multidimensional interval event items mining tasks. This algorithm adds the processing of interval event items in the mining process. We can get richer and more in line with actual needs information from mined sequence patterns through these methods. This scheme is applied to the actual website behaviour analysis task to obtain more valuable information for web optimization and provide more valuable sequence pattern information for practical problems. This work also opens a new pathway toward more efficient sequential pattern mining tasks

Discovering human activities from binary data in smart homes

With the rapid development in sensing technology, data mining, and machine learning fields for human health monitoring, it became possible to enable monitoring of personal motion and vital signs in a manner that minimizes the disruption of an individual’s daily routine and assist individuals with difficulties to live independently at home. A primary difficulty that researchers confront is acquiring an adequate amount of labeled data for model training and validation purposes. Therefore, activity discovery handles the problem that activity labels are not available using approaches based on sequence mining and clustering. In this paper, we introduce an unsupervised method for discovering activities from a network of motion detectors in a smart home setting. First, we present an intra-day clustering algorithm to find frequent sequential patterns within a day. As a second step, we present an inter-day clustering algorithm to find the common frequent patterns between days. Furthermore, we refine the patterns to have more compressed and defined cluster characterizations. Finally, we track the occurrences of various regular routines to monitor the functional health in an individual’s patterns and lifestyle. We evaluate our methods on two public data sets captured in real-life settings from two apartments during seven-month and three-month periods

Discovering Novelty in Gene Data : From Sequential Patterns to Visualization

International audienceData mining techniques allow users to discover novelty in huge amounts of data. Frequent pattern methods have proved to be efficient, but the extracted patterns are often too numerous and thus difficult to analyse by end-users. In this paper, we focus on sequential pattern mining and propose a new visualization system, which aims at helping end-users to analyse extracted nowledge and to highlight the novelty according to referenced biological document databases. Our system is based on two visualization techniques: Clouds and solar systems. We show that these techniques are very helpful for identifying associations and hierarchical relationships between patterns among related documents. Sequential patterns extracted from gene data using our system were successfully evaluated by two biology laboratories working on Alzheimers disease and cancer

Frequent Pattern Comparative Analysis of Apriori and FLAG Matrix

Abstract: Data mining is the computational process of discovering patterns in large data sets involving methods at the intersection of artificial intelligence, machine learning, statistics, and systems. The overall goal of the data mining process is to extract information from a data set and transform it into an understandable structure for further use. In this paper we are proposed to find the frequent sequential patterns in a large uncertain database. For the finding of frequent pattern we are using Flag Matrix approach. The Flag Matrix approach is efficient and more flexible for finding the frequent pattern. By using this approach we can reduce the time complexity for finding frequent patterns

Sequential pattern mining with uncertain data

In recent years, a number of emerging applications, such as sensor monitoring systems, RFID networks and location based services, have led to the proliferation of uncertain data. However, traditional data mining algorithms are usually inapplicable in uncertain data because of its probabilistic nature. Uncertainty has to be carefully handled; otherwise, it might significantly downgrade the quality of underlying data mining applications. Therefore, we extend traditional data mining algorithms into their uncertain versions so that they still can produce accurate results. In particular, we use a motivating example of sequential pattern mining to illustrate how to incorporate uncertain information in the process of data mining. We use possible world semantics to interpret two typical types of uncertainty: the tuple-level existential uncertainty and the attribute-level temporal uncertainty. In an uncertain database, it is probabilistic that a pattern is frequent or not; thus, we define the concept of probabilistic frequent sequential patterns. And various algorithms are designed to mine probabilistic frequent patterns efficiently in uncertain databases. We also implement our algorithms on distributed computing platforms, such as MapReduce and Spark, so that they can be applied in large scale databases. Our work also includes uncertainty computation in supervised machine learning algorithms. We develop an artificial neural network to classify numeric uncertain data; and a Naive Bayesian classifier is designed for classifying categorical uncertain data streams. We also propose a discretization algorithm to pre-process numerical uncertain data, since many classifiers work with categoric data only. And experimental results in both synthetic and real-world uncertain datasets demonstrate that our methods are effective and efficient

Dynamic load balancing for the distributed mining of molecular structures

In molecular biology, it is often desirable to find common properties in large numbers of drug candidates. One family of methods stems from the data mining community, where algorithms to find frequent graphs have received increasing attention over the past years. However, the computational complexity of the underlying problem and the large amount of data to be explored essentially render sequential algorithms useless. In this paper, we present a distributed approach to the frequent subgraph mining problem to discover interesting patterns in molecular compounds. This problem is characterized by a highly irregular search tree, whereby no reliable workload prediction is available. We describe the three main aspects of the proposed distributed algorithm, namely, a dynamic partitioning of the search space, a distribution process based on a peer-to-peer communication framework, and a novel receiverinitiated load balancing algorithm. The effectiveness of the distributed method has been evaluated on the well-known National Cancer Institute’s HIV-screening data set, where we were able to show close-to linear speedup in a network of workstations. The proposed approach also allows for dynamic resource aggregation in a non dedicated computational environment. These features make it suitable for large-scale, multi-domain, heterogeneous environments, such as computational grids