Development of techniques to classify marine benthic habitats using hyperspectral imagery in oligotrophic, temperate waters

There is an increasing need for more detailed knowledge about the spatial distribution and structure of shallow water benthic habitats for marine conservation and planning. This, linked with improvements in hyperspectral image sensors provides an increased opportunity to develop new techniques to better utilise these data in marine mapping projects. The oligotrophic, optically-shallow waters surrounding Rottnest Island, Western Australia, provide a unique opportunity to develop and apply these new mapping techniques. The three flight lines of HyMap hyperspectral data flown for the Rottnest Island Reserve (RIR) in April 2004 were corrected for atmospheric effects, sunglint and the influence of the water column using the Modular Inversion and Processing System. A digital bathymetry model was created for the RIR using existing soundings data and used to create a range of topographic variables (e.g. slope) and other spatially relevant environmental variables (e.g. exposure to waves) that could be used to improve the ecological description of the benthic habitats identified in the hyperspectral imagery. A hierarchical habitat classification scheme was developed for Rottnest Island based on the dominant habitat components, such as Ecklonia radiata or Posidonia sinuosa. A library of 296 spectral signatures at HyMap spectral resolution (~15 nm) was created from >6000 in situ measurements of the dominant habitat components and subjected to spectral separation analysis at all levels of the habitat classification scheme. A separation analysis technique was developed using a multivariate statistical optimisation approach that utilised a genetic algorithm in concert with a range of spectral metrics to determine the optimum set of image bands to achieve maximum separation at each classification level using the entire spectral library. These results determined that many of the dominant habitat components could be separated spectrally as pure spectra, although there were almost always some overlapping samples from most classes at each split in the scheme. This led to the development of a classification algorithm that accounted for these overlaps. This algorithm was tested using mixture analysis, which attempted to identify 10 000 synthetically mixed signatures, with a known dominant component, on each run. The algorithm was applied directly to the water-corrected bottom reflectance data to classify the benthic habitats. At the broadest scale, bio-substrate regions were separated from bare substrates in the image with an overall accuracy of 95% and, at the finest scale, bare substrates, Posidonia, Amphibolis, Ecklonia radiata, Sargassum species, algal turf and coral were separated with an accuracy of 70%. The application of these habitat maps to a number of marine planning and management scenarios, such as marine conservation and the placement of boat moorings at dive sites was demonstrated. Committee Informatio

Automated identification of river hydromorphological features using UAV high resolution aerial imagery

European legislation is driving the development of methods for river ecosystem protection in light of concerns over water quality and ecology. Key to their success is the accurate and rapid characterisation of physical features (i.e., hydromorphology) along the river. Image pattern recognition techniques have been successfully used for this purpose. The reliability of the methodology depends on both the quality of the aerial imagery and the pattern recognition technique used. Recent studies have proved the potential of Unmanned Aerial Vehicles (UAVs) to increase the quality of the imagery by capturing high resolution photography. Similarly, Artificial Neural Networks (ANN) have been shown to be a high precision tool for automated recognition of environmental patterns. This paper presents a UAV based framework for the identification of hydromorphological features from high resolution RGB aerial imagery using a novel classification technique based on ANNs. The framework is developed for a 1.4 km river reach along the river Dee in Wales, United Kingdom. For this purpose, a Falcon 8 octocopter was used to gather 2.5 cm resolution imagery. The results show that the accuracy of the framework is above 81%, performing particularly well at recognising vegetation. These results leverage the use of UAVs for environmental policy implementation and demonstrate the potential of ANNs and RGB imagery for high precision river monitoring and river management

Hyperspectral-Augmented Target Tracking

With the global war on terrorism, the nature of military warfare has changed significantly. The United States Air Force is at the forefront of research and development in the field of intelligence, surveillance, and reconnaissance that provides American forces on the ground and in the air with the capability to seek, monitor, and destroy mobile terrorist targets in hostile territory. One such capability recognizes and persistently tracks multiple moving vehicles in complex, highly ambiguous urban environments. The thesis investigates the feasibility of augmenting a multiple-target tracking system with hyperspectral imagery. The research effort evaluates hyperspectral data classification using fuzzy c-means and the self-organizing map clustering algorithms for remote identification of moving vehicles. Results demonstrate a resounding 29.33% gain in performance from the baseline kinematic-only tracking to the hyperspectral-augmented tracking. Through a novel methodology, the hyperspectral observations are integrated in the MTT paradigm. Furthermore, several novel ideas are developed and implemented—spectral gating of hyperspectral observations, a cost function for hyperspectral observation-to-track association, and a self-organizing map filtering method. It appears that relatively little work in the target tracking and hyperspectral image classification literature exists that addresses these areas. Finally, two hyperspectral sensor modes are evaluated—Pushbroom and Region-of-Interest. Both modes are based on realistic technologies, and investigating their performance is the goal of performance-driven sensing. Performance comparison of the two modes can drive future design of hyperspectral sensors

Spectral Target Detection using Physics-Based Modeling and a Manifold Learning Technique

Identification of materials from calibrated radiance data collected by an airborne imaging spectrometer depends strongly on the atmospheric and illumination conditions at the time of collection. This thesis demonstrates a methodology for identifying material spectra using the assumption that each unique material class forms a lower-dimensional manifold (surface) in the higher-dimensional spectral radiance space and that all image spectra reside on, or near, these theoretic manifolds. Using a physical model, a manifold characteristic of the target material exposed to varying illumination and atmospheric conditions is formed. A graph-based model is then applied to the radiance data to capture the intricate structure of each material manifold, followed by the application of the commute time distance (CTD) transformation to separate the target manifold from the background. Detection algorithms are then applied in the CTD subspace. This nonlinear transformation is based on a random walk on a graph and is derived from an eigendecomposition of the pseudoinverse of the graph Laplacian matrix. This work provides a geometric interpretation of the CTD transformation, its algebraic properties, the atmospheric and illumination parameters varied in the physics-based model, and the influence the target manifold samples have on the orientation of the coordinate axes in the transformed space. This thesis concludes by demonstrating improved detection results in the CTD subspace as compared to detection in the original spectral radiance space

Hyperspectral Imagery Target Detection Using Improved Anomaly Detection and Signature Matching Methods

This research extends the field of hyperspectral target detection by developing autonomous anomaly detection and signature matching methodologies that reduce false alarms relative to existing benchmark detectors, and are practical for use in an operational environment. The proposed anomaly detection methodology adapts multivariate outlier detection algorithms for use with hyperspectral datasets containing tens of thousands of non-homogeneous, high-dimensional spectral signatures. In so doing, the limitations of existing, non-robust, anomaly detectors are identified, an autonomous clustering methodology is developed to divide an image into homogeneous background materials, and competing multivariate outlier detection methods are evaluated for their ability to uncover hyperspectral anomalies. To arrive at a final detection algorithm, robust parameter design methods are employed to determine parameter settings that achieve good detection performance over a range of hyperspectral images and targets, thereby removing the burden of these decisions from the user. The final anomaly detection algorithm is tested against existing local and global anomaly detectors, and is shown to achieve superior detection accuracy when applied to a diverse set of hyperspectral images. The proposed signature matching methodology employs image-based atmospheric correction techniques in an automated process to transform a target reflectance signature library into a set of image signatures. This set of signatures is combined with an existing linear filter to form a target detector that is shown to perform as well or better relative to detectors that rely on complicated, information-intensive, atmospheric correction schemes. The performance of the proposed methodology is assessed using a range of target materials in both woodland and desert hyperspectral scenes

Graph Laplacian for Image Anomaly Detection

Reed-Xiaoli detector (RXD) is recognized as the benchmark algorithm for image anomaly detection; however, it presents known limitations, namely the dependence over the image following a multivariate Gaussian model, the estimation and inversion of a high-dimensional covariance matrix, and the inability to effectively include spatial awareness in its evaluation. In this work, a novel graph-based solution to the image anomaly detection problem is proposed; leveraging the graph Fourier transform, we are able to overcome some of RXD's limitations while reducing computational cost at the same time. Tests over both hyperspectral and medical images, using both synthetic and real anomalies, prove the proposed technique is able to obtain significant gains over performance by other algorithms in the state of the art.Comment: Published in Machine Vision and Applications (Springer