The Semantic Grid: A future e-Science infrastructure

e-Science offers a promising vision of how computer and communication technology can support and enhance the scientific process. It does this by enabling scientists to generate, analyse, share and discuss their insights, experiments and results in an effective manner. The underlying computer infrastructure that provides these facilities is commonly referred to as the Grid. At this time, there are a number of grid applications being developed and there is a whole raft of computer technologies that provide fragments of the necessary functionality. However there is currently a major gap between these endeavours and the vision of e-Science in which there is a high degree of easy-to-use and seamless automation and in which there are flexible collaborations and computations on a global scale. To bridge this practice–aspiration divide, this paper presents a research agenda whose aim is to move from the current state of the art in e-Science infrastructure, to the future infrastructure that is needed to support the full richness of the e-Science vision. Here the future e-Science research infrastructure is termed the Semantic Grid (Semantic Grid to Grid is meant to connote a similar relationship to the one that exists between the Semantic Web and the Web). In particular, we present a conceptual architecture for the Semantic Grid. This architecture adopts a service-oriented perspective in which distinct stakeholders in the scientific process, represented as software agents, provide services to one another, under various service level agreements, in various forms of marketplace. We then focus predominantly on the issues concerned with the way that knowledge is acquired and used in such environments since we believe this is the key differentiator between current grid endeavours and those envisioned for the Semantic Grid

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Semantic-Based, Scalable, Decentralized and Dynamic Resource Discovery for Internet-Based Distributed System

Resource Discovery (RD) is a key issue in Internet-based distributed sytems such as grid. RD is about locating an appropriate resource/service type that matches the user's application requirements. This is very important, as resource reservation and task scheduling are based on it. Unfortunately, RD in grid is very challenging as resources and users are distributed, resources are heterogeneous in their platforms, status of the resources is dynamic (resources can join or leave the system without any prior notice) and most recently the introduction of a new type of grid called intergrid (grid of grids) with the use of multi middlewares. Such situation requires an RD system that has rich interoperability, scalability, decentralization and dynamism features. However, existing grid RD systems have difficulties to attain these features. Not only that, they lack the review and evaluation studies, which may highlight the gap in achieving the required features. Therefore, this work discusses the problem associated with intergrid RD from two perspectives. First, reviewing and classifying the current grid RD systems in such a way that may be useful for discussing and comparing them. Second, propose a novel RD framework that has the aforementioned required RD features. In the former, we mainly focus on the studies that aim to achieve interoperability in the first place, which are known as RD systems that use semantic information (semantic technology). In particular, we classify such systems based on their qualitative use of the semantic information. We evaluate the classified studies based on their degree of accomplishment of interoperability and the other RD requirements, and draw the future research direction of this field. Meanwhile in the latter, we name the new framework as semantic-based scalable decentralized dynamic RD. The framework further contains two main components which are service description, and service registration and discovery models. The earlier consists of a set of ontologies and services. Ontologies are used as a data model for service description, whereas the services are to accomplish the description process. The service registration is also based on ontology, where nodes of the service (service providers) are classified to some classes according to the ontology concepts, which means each class represents a concept in the ontology. Each class has a head, which is elected among its own class I nodes/members. Head plays the role of a registry in its class and communicates with I the other heads of the classes in a peer to peer manner during the discovery process. We further introduce two intelligent agents to automate the discovery process which are Request Agent (RA) and Description Agent (DA). Eaclj. node is supposed to have both agents. DA describes the service capabilities based on the ontology, and RA I carries the service requests based on the ontology as well. We design a service search I algorithm for the RA that starts the service look up from the class of request origin first, then to the other classes. We finally evaluate the performance of our framework ~ith extensive simulation experiments, the result of which confirms the effectiveness of the proposed system in satisfying the required RD features (interoperability, scalability, decentralization and dynamism). In short, our main contributions are outlined new key taxonomy for the semantic-based grid RD studies; an interoperable semantic description RD component model for intergrid services metadata representation; a semantic distributed registry architecture for indexing service metadata; and an agent-qased service search and selection algorithm. Vll

Nanoinformatics: a new area of research in nanomedicine

Over a decade ago, nanotechnologists began research on applications of nanomaterials for medicine. This research has revealed a wide range of different challenges, as well as many opportunities. Some of these challenges are strongly related to informatics issues, dealing, for instance, with the management and integration of heterogeneous information, defining nomenclatures, taxonomies and classifications for various types of nanomaterials, and research on new modeling and simulation techniques for nanoparticles. Nanoinformatics has recently emerged in the USA and Europe to address these issues. In this paper, we present a review of nanoinformatics, describing its origins, the problems it addresses, areas of interest, and examples of current research initiatives and informatics resources. We suggest that nanoinformatics could accelerate research and development in nanomedicine, as has occurred in the past in other fields. For instance, biomedical informatics served as a fundamental catalyst for the Human Genome Project, and other genomic and ?omics projects, as well as the translational efforts that link resulting molecular-level research to clinical problems and findings

Nanoinformatics: a new area of research in nanomedicine

pre-printAbstract: Over a decade ago, nanotechnologists began research on applications of nanomaterials for medicine. This research has revealed a wide range of different challenges, as well as many opportunities. Some of these challenges are strongly related to informatics issues, dealing, for instance, with the management and integration of heterogeneous information, defining nomenclatures, taxonomies and classifications for various types of nanomaterials, and research on new modeling and simulation techniques for nanoparticles. Nanoinformatics has recently emerged in the USA and Europe to address these issues. In this paper, we present a review of nanoinformatics, describing its origins, the problems it addresses, areas of interest, and examples of current research initiatives and informatics resources. We suggest that nanoinformatics could accelerate research and development in nanomedicine, as has occurred in the past in other fields. For instance, biomedical informatics served as a fundamental catalyst for the Human Genome Project, and other genomic and -omics projects, as well as the translational efforts that link resulting molecular-level research to clinical problems and findings

Combining SOA and BPM Technologies for Cross-System Process Automation

This paper summarizes the results of an industry case study that introduced a cross-system business process automation solution based on a combination of SOA and BPM standard technologies (i.e., BPMN, BPEL, WSDL). Besides discussing major weaknesses of the existing, custom-built, solution and comparing them against experiences with the developed prototype, the paper presents a course of action for transforming the current solution into the proposed solution. This includes a general approach, consisting of four distinct steps, as well as specific action items that are to be performed for every step. The discussion also covers language and tool support and challenges arising from the transformation

Digital Twins and the Future of their Use Enabling Shift Left and Shift Right Cybersecurity Operations

Digital Twins (DTs), optimize operations and monitor performance in Smart Critical Systems (SCS) domains like smart grids and manufacturing. DT-based cybersecurity solutions are in their infancy, lacking a unified strategy to overcome challenges spanning next three to five decades. These challenges include reliable data accessibility from Cyber-Physical Systems (CPS), operating in unpredictable environments. Reliable data sources are pivotal for intelligent cybersecurity operations aided with underlying modeling capabilities across the SCS lifecycle, necessitating a DT. To address these challenges, we propose Security Digital Twins (SDTs) collecting realtime data from CPS, requiring the Shift Left and Shift Right (SLSR) design paradigm for SDT to implement both design time and runtime cybersecurity operations. Incorporating virtual CPS components (VC) in Cloud/Edge, data fusion to SDT models is enabled with high reliability, providing threat insights and enhancing cyber resilience. VC-enabled SDT ensures accurate data feeds for security monitoring for both design and runtime. This design paradigm shift propagates innovative SDT modeling and analytics for securing future critical systems. This vision paper outlines intelligent SDT design through innovative techniques, exploring hybrid intelligence with data-driven and rule-based semantic SDT models. Various operational use cases are discussed for securing smart critical systems through underlying modeling and analytics capabilities.Comment: IEEE Submitted Paper: Trust, Privacy and Security in Intelligent Systems, and Application

Expert System for Nutrition Care Process of Older Adults

This paper presents an expert system for a nutrition care process tailored for the specific needs of elders. Dietary knowledge is defined by nutritionists and encoded as Nutrition Care Process Ontology, and then used as underlining base and standardized model for the nutrition care planning. An inference engine is developed on top of the ontology, providing semantic reasoning infrastructure and mechanisms for evaluating the rules defined for assessing short and long term elders’ self-feeding behaviours, to identify unhealthy dietary patterns and detect the early instauration of malnutrition. Our expert system provides personalized intervention plans covering nutrition education, diet prescription and food ordering adapted to the older adult’s specific nutritional needs, health conditions and food preferences. In-lab evaluation results are presented proving the usefulness and quality of the expert system as well as the computational efficiency, coupling and cohesion of the defined ontology

Proceedings of the 2004 ONR Decision-Support Workshop Series: Interoperability

In August of 1998 the Collaborative Agent Design Research Center (CADRC) of the California Polytechnic State University in San Luis Obispo (Cal Poly), approached Dr. Phillip Abraham of the Office of Naval Research (ONR) with the proposal for an annual workshop focusing on emerging concepts in decision-support systems for military applications. The proposal was considered timely by the ONR Logistics Program Office for at least two reasons. First, rapid advances in information systems technology over the past decade had produced distributed collaborative computer-assistance capabilities with profound potential for providing meaningful support to military decision makers. Indeed, some systems based on these new capabilities such as the Integrated Marine Multi-Agent Command and Control System (IMMACCS) and the Integrated Computerized Deployment System (ICODES) had already reached the field-testing and final product stages, respectively. Second, over the past two decades the US Navy and Marine Corps had been increasingly challenged by missions demanding the rapid deployment of forces into hostile or devastate dterritories with minimum or non-existent indigenous support capabilities. Under these conditions Marine Corps forces had to rely mostly, if not entirely, on sea-based support and sustainment operations. Particularly today, operational strategies such as Operational Maneuver From The Sea (OMFTS) and Sea To Objective Maneuver (STOM) are very much in need of intelligent, near real-time and adaptive decision-support tools to assist military commanders and their staff under conditions of rapid change and overwhelming data loads. In the light of these developments the Logistics Program Office of ONR considered it timely to provide an annual forum for the interchange of ideas, needs and concepts that would address the decision-support requirements and opportunities in combined Navy and Marine Corps sea-based warfare and humanitarian relief operations. The first ONR Workshop was held April 20-22, 1999 at the Embassy Suites Hotel in San Luis Obispo, California. It focused on advances in technology with particular emphasis on an emerging family of powerful computer-based tools, and concluded that the most able members of this family of tools appear to be computer-based agents that are capable of communicating within a virtual environment of the real world. From 2001 onward the venue of the Workshop moved from the West Coast to Washington, and in 2003 the sponsorship was taken over by ONR’s Littoral Combat/Power Projection (FNC) Program Office (Program Manager: Mr. Barry Blumenthal). Themes and keynote speakers of past Workshops have included: 1999: ‘Collaborative Decision Making Tools’ Vadm Jerry Tuttle (USN Ret.); LtGen Paul Van Riper (USMC Ret.);Radm Leland Kollmorgen (USN Ret.); and, Dr. Gary Klein (KleinAssociates) 2000: ‘The Human-Computer Partnership in Decision-Support’ Dr. Ronald DeMarco (Associate Technical Director, ONR); Radm CharlesMunns; Col Robert Schmidle; and, Col Ray Cole (USMC Ret.) 2001: ‘Continuing the Revolution in Military Affairs’ Mr. Andrew Marshall (Director, Office of Net Assessment, OSD); and,Radm Jay M. Cohen (Chief of Naval Research, ONR) 2002: ‘Transformation ... ’ Vadm Jerry Tuttle (USN Ret.); and, Steve Cooper (CIO, Office ofHomeland Security) 2003: ‘Developing the New Infostructure’ Richard P. Lee (Assistant Deputy Under Secretary, OSD); and, MichaelO’Neil (Boeing) 2004: ‘Interoperability’ MajGen Bradley M. Lott (USMC), Deputy Commanding General, Marine Corps Combat Development Command; Donald Diggs, Director, C2 Policy, OASD (NII

Semantic-Based, Scalable, Decentralized and Dynamic Resource Discovery for Internet-Based Distributed System

Resource Discovery (RD) is a key issue in Internet-based distributed sytems such as grid. RD is about locating an appropriate resource/service type that matches the user's application requirements. This is very important, as resource reservation and task scheduling are based on it. Unfortunately, RD in grid is very challenging as resources and users are distributed, resources are heterogeneous in their platforms, status of the resources is dynamic (resources can join or leave the system without any prior notice) and most recently the introduction of a new type of grid called intergrid (grid of grids) with the use of multi middlewares. Such situation requires an RD system that has rich interoperability, scalability, decentralization and dynamism features. However, existing grid RD systems have difficulties to attain these features. Not only that, they lack the review and evaluation studies, which may highlight the gap in achieving the required features. Therefore, this work discusses the problem associated with intergrid RD from two perspectives. First, reviewing and classifying the current grid RD systems in such a way that may be useful for discussing and comparing them. Second, propose a novel RD framework that has the aforementioned required RD features. In the former, we mainly focus on the studies that aim to achieve interoperability in the first place, which are known as RD systems that use semantic information (semantic technology). In particular, we classify such systems based on their qualitative use of the semantic information. We evaluate the classified studies based on their degree of accomplishment of interoperability and the other RD requirements, and draw the future research direction of this field. Meanwhile in the latter, we name the new framework as semantic-based scalable decentralized dynamic RD. The framework further contains two main components which are service description, and service registration and discovery models. The earlier consists of a set of ontologies and services. Ontologies are used as a data model for service description, whereas the services are to accomplish the description process. The service registration is also based on ontology, where nodes of the service (service providers) are classified to some classes according to the ontology concepts, which means each class represents a concept in the ontology. Each class has a head, which is elected among its own class I nodes/members. Head plays the role of a registry in its class and communicates with I the other heads of the classes in a peer to peer manner during the discovery process. We further introduce two intelligent agents to automate the discovery process which are Request Agent (RA) and Description Agent (DA). Eaclj. node is supposed to have both agents. DA describes the service capabilities based on the ontology, and RA I carries the service requests based on the ontology as well. We design a service search I algorithm for the RA that starts the service look up from the class of request origin first, then to the other classes. We finally evaluate the performance of our framework ~ith extensive simulation experiments, the result of which confirms the effectiveness of the proposed system in satisfying the required RD features (interoperability, scalability, decentralization and dynamism). In short, our main contributions are outlined new key taxonomy for the semantic-based grid RD studies; an interoperable semantic description RD component model for intergrid services metadata representation; a semantic distributed registry architecture for indexing service metadata; and an agent-qased service search and selection algorithm. Vll