Structured Operational Semantics for Graph Rewriting

Process calculi and graph transformation systems provide models of reactive systems with labelled transition semantics (LTS). While the semantics for process calculi is compositional, this is not the case for graph transformation systems, in general. Hence, the goal of this article is to obtain a compositional semantics for graph transformation system in analogy to the structural operational semantics (SOS) for Milner's Calculus of Communicating Systems (CCS). The paper introduces an SOS style axiomatization of the standard labelled transition semantics for graph transformation systems that is based on the idea of minimal reaction contexts as labels, due to Leifer and Milner. In comparison to previous work on inductive definitions of similarly derived LTSs, the main feature of the proposed axiomatization is a composition rule that captures the communication of sub-systems so that it can feature as a counterpart to the communication rule of CCS

Labelled transitions for Mobile Ambients (as synthesized via a graphical encoding)

The paper presents a case study on the synthesis of labelled transition systems (LTSs) for process calculi, choosing as testbed Cardelli and Gordon's Mobile Ambients (MAs). The proposal is based on a graphical encoding: each process is mapped into a graph equipped with suitable interfaces, such that the denotation is fully abstract with respect to the usual structural congruence. Graphs with interfaces are amenable to the synthesis mechanism proposed by Ehrig and König and based on borrowed contexts (BCs), an instance of relative pushouts, introduced by Leifer and Milner. The BC mechanism allows the effective construction of a LTS that has graphs with interfaces as both states and labels, and such that the associated bisimilarity is automatically a congruence. Our paper focuses on the analysis of a LTS over (processes as) graphs with interfaces, as distilled by exploiting the graphical encoding of MAs. In particular, we use the LTS on graphs to recover a suitable LTS directly defined over the structure of MAs processes

Labelled Transitions for Mobile Ambients (As Synthesized via a Graphical Encoding)

The paper presents a case study on the synthesis of labelled transition systems (LTSs) for process calculi, choosing as testbed Cardelli and Gordon’s Mobile Ambients (MAs). The proposal is based on a graphical encoding: each process is mapped into a graph equipped with suitable interfaces, such that the denotation is fully abstract with respect to the usual structural congruence. Graphs with interfaces are amenable to the synthesis mechanism proposed by Ehrig and König and based on borrowed contexts (BCs), an instance of relative pushouts, introduced by Leifer and Milner. The BC mechanism allows the effective construction of a LTS that has graphs with interfaces as both states and labels, and such that the associated bisimilarity is automatically a congruence. Our paper focuses on the analysis of a LTS over (processes as) graphs with interfaces, as distilled by exploiting the graphical encoding of MAs. In particular, we use the LTS on graphs to recover a suitable LTS directly defined over the structure of MAs processes

A Flat Process Calculus for Nested Membrane Interactions

The link-calculus has been recently proposed as a process calculus for representing interactions that are open (i.e., that the number of processes may vary), and multiparty (i.e., that may involve more than two processes). Here, we apply the link-calculus for expressing, possibly hierarchical and non dyadic, biological interactions. In particular, we provide a natural encoding of Cardelli's Brane calculus, a compartment-based calculus, introduced to model the behaviour of nested membranes. Notably, the link-calculus is flat, but we can model membranes just as special processes taking part in the biological reaction. Moreover, we give evidence that the link-calculus allows one to directly model biological phenomena at the more appropriate level of abstraction

RPO Semantics for Mobile Ambients

The paper focuses on the synthesis of labelled transition systems (LTSs) for process calculi, choosing as testbed Mobile Ambients (MAs). The proposal is based on a graphical encoding: a process is mapped into a graph equipped with interfaces, such that the denotation is fully abstract with respect to the standard structural congruence. Graphs with interfaces are amenable to the synthesis mechanism based on borrowed contexts (BCs), an instance of relative pushouts (RPOs). The BC mechanism allows the effective construction of a LTS that has graphs with interfaces as states and labels, and such that the associated bisimilarity is a congruence. Our paper focuses on the analysis of a LTS over processes as graphs with interfaces: we use the LTS on graphs to recover a LTS directly defined over the structure of MAs processes, further defining a set of SOS inference rules capturing the same operational semantics

Adequacy Issues in Reactive Systems: Barbed Semantics for Mobile Ambients

Reactive systems represent a meta-framework aimed at deriving behavioral congruences for those specification formalisms whose operational semantics is provided by rewriting rules. The aim of this thesis is to address one of the main issues of the framework, concerning the adequacy of the standard observational semantics (the IPO and the saturated one) in modelling the concrete semantics of actual formalisms. The problem is that IPO-bisimilarity (obtained considering only minimal labels) is often too discriminating, while the saturated one (via all labels) may be too coarse, and intermediate proposals should then be put forward. We then introduce a more expressive semantics for reactive systems which, thanks to its flexibility, allows for recasting a wide variety of observational, bisimulation-based equivalences. In particular, we propose suitable notions of barbed and weak barbed semantics for reactive systems, and an efficient characterization of them through the IPO-transition systems. We also propose a novel, more general behavioural equivalence: L-bisimilarity, which is able to recast both its IPO and saturated counterparts, as well as the barbed one. The equivalence is parametric with respect to a set L of reactive systems labels, and it is shown that under mild conditions on L it is a congruence. In order to provide a suitable test-bed, we instantiate our proposal over the asynchronous CCS and, most importantly, over the mobile ambients calculus, whose semantics is still in a flux