4,684 research outputs found
Divide and Conquer Kernel Ridge Regression: A Distributed Algorithm with Minimax Optimal Rates
We establish optimal convergence rates for a decomposition-based scalable
approach to kernel ridge regression. The method is simple to describe: it
randomly partitions a dataset of size N into m subsets of equal size, computes
an independent kernel ridge regression estimator for each subset, then averages
the local solutions into a global predictor. This partitioning leads to a
substantial reduction in computation time versus the standard approach of
performing kernel ridge regression on all N samples. Our two main theorems
establish that despite the computational speed-up, statistical optimality is
retained: as long as m is not too large, the partition-based estimator achieves
the statistical minimax rate over all estimators using the set of N samples. As
concrete examples, our theory guarantees that the number of processors m may
grow nearly linearly for finite-rank kernels and Gaussian kernels and
polynomially in N for Sobolev spaces, which in turn allows for substantial
reductions in computational cost. We conclude with experiments on both
simulated data and a music-prediction task that complement our theoretical
results, exhibiting the computational and statistical benefits of our approach
Sparse Volterra and Polynomial Regression Models: Recoverability and Estimation
Volterra and polynomial regression models play a major role in nonlinear
system identification and inference tasks. Exciting applications ranging from
neuroscience to genome-wide association analysis build on these models with the
additional requirement of parsimony. This requirement has high interpretative
value, but unfortunately cannot be met by least-squares based or kernel
regression methods. To this end, compressed sampling (CS) approaches, already
successful in linear regression settings, can offer a viable alternative. The
viability of CS for sparse Volterra and polynomial models is the core theme of
this work. A common sparse regression task is initially posed for the two
models. Building on (weighted) Lasso-based schemes, an adaptive RLS-type
algorithm is developed for sparse polynomial regressions. The identifiability
of polynomial models is critically challenged by dimensionality. However,
following the CS principle, when these models are sparse, they could be
recovered by far fewer measurements. To quantify the sufficient number of
measurements for a given level of sparsity, restricted isometry properties
(RIP) are investigated in commonly met polynomial regression settings,
generalizing known results for their linear counterparts. The merits of the
novel (weighted) adaptive CS algorithms to sparse polynomial modeling are
verified through synthetic as well as real data tests for genotype-phenotype
analysis.Comment: 20 pages, to appear in IEEE Trans. on Signal Processin
Transferable atomic multipole machine learning models for small organic molecules
Accurate representation of the molecular electrostatic potential, which is
often expanded in distributed multipole moments, is crucial for an efficient
evaluation of intermolecular interactions. Here we introduce a machine learning
model for multipole coefficients of atom types H, C, O, N, S, F, and Cl in any
molecular conformation. The model is trained on quantum chemical results for
atoms in varying chemical environments drawn from thousands of organic
molecules. Multipoles in systems with neutral, cationic, and anionic molecular
charge states are treated with individual models. The models' predictive
accuracy and applicability are illustrated by evaluating intermolecular
interaction energies of nearly 1,000 dimers and the cohesive energy of the
benzene crystal.Comment: 11 pages, 6 figure
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