Neural activity classification with machine learning models trained on interspike interval series data

The flow of information through the brain is reflected by the activity patterns of neural cells. Indeed, these firing patterns are widely used as input data to predictive models that relate stimuli and animal behavior to the activity of a population of neurons. However, relatively little attention was paid to single neuron spike trains as predictors of cell or network properties in the brain. In this work, we introduce an approach to neuronal spike train data mining which enables effective classification and clustering of neuron types and network activity states based on single-cell spiking patterns. This approach is centered around applying state-of-the-art time series classification/clustering methods to sequences of interspike intervals recorded from single neurons. We demonstrate good performance of these methods in tasks involving classification of neuron type (e.g. excitatory vs. inhibitory cells) and/or neural circuit activity state (e.g. awake vs. REM sleep vs. nonREM sleep states) on an open-access cortical spiking activity dataset

Are v1 simple cells optimized for visual occlusions? : A comparative study

Abstract: Simple cells in primary visual cortex were famously found to respond to low-level image components such as edges. Sparse coding and independent component analysis (ICA) emerged as the standard computational models for simple cell coding because they linked their receptive fields to the statistics of visual stimuli. However, a salient feature of image statistics, occlusions of image components, is not considered by these models. Here we ask if occlusions have an effect on the predicted shapes of simple cell receptive fields. We use a comparative approach to answer this question and investigate two models for simple cells: a standard linear model and an occlusive model. For both models we simultaneously estimate optimal receptive fields, sparsity and stimulus noise. The two models are identical except for their component superposition assumption. We find the image encoding and receptive fields predicted by the models to differ significantly. While both models predict many Gabor-like fields, the occlusive model predicts a much sparser encoding and high percentages of ‘globular’ receptive fields. This relatively new center-surround type of simple cell response is observed since reverse correlation is used in experimental studies. While high percentages of ‘globular’ fields can be obtained using specific choices of sparsity and overcompleteness in linear sparse coding, no or only low proportions are reported in the vast majority of studies on linear models (including all ICA models). Likewise, for the here investigated linear model and optimal sparsity, only low proportions of ‘globular’ fields are observed. In comparison, the occlusive model robustly infers high proportions and can match the experimentally observed high proportions of ‘globular’ fields well. Our computational study, therefore, suggests that ‘globular’ fields may be evidence for an optimal encoding of visual occlusions in primary visual cortex. Author Summary: The statistics of our visual world is dominated by occlusions. Almost every image processed by our brain consists of mutually occluding objects, animals and plants. Our visual cortex is optimized through evolution and throughout our lifespan for such stimuli. Yet, the standard computational models of primary visual processing do not consider occlusions. In this study, we ask what effects visual occlusions may have on predicted response properties of simple cells which are the first cortical processing units for images. Our results suggest that recently observed differences between experiments and predictions of the standard simple cell models can be attributed to occlusions. The most significant consequence of occlusions is the prediction of many cells sensitive to center-surround stimuli. Experimentally, large quantities of such cells are observed since new techniques (reverse correlation) are used. Without occlusions, they are only obtained for specific settings and none of the seminal studies (sparse coding, ICA) predicted such fields. In contrast, the new type of response naturally emerges as soon as occlusions are considered. In comparison with recent in vivo experiments we find that occlusive models are consistent with the high percentages of center-surround simple cells observed in macaque monkeys, ferrets and mice

Automated Synthesis of Quantum Subcircuits

The quantum computer has become contemporary reality, with the first two-qubit machine of mere decades ago transforming into cloud-accessible devices with tens, hundreds, or--in a few cases--even thousands of qubits. While such hardware is noisy and still relatively small, the increasing number of operable qubits raises another challenge: how to develop the now-sizeable quantum circuits executable on these machines. Preparing circuits manually for specifications of any meaningful size is at best tedious and at worst impossible, creating a need for automation. This article describes an automated quantum-software toolkit for synthesis, compilation, and optimization, which transforms classically-specified, irreversible functions to both technology-independent and technology-dependent quantum circuits. We also describe and analyze the toolkit's application to three situations--quantum read-only memories, quantum random number generators, and quantum oracles--and illustrate the toolkit's start-to-finish features from the input of classical functions to the output of quantum circuits ready-to-run on commercial hardware. Furthermore, we illustrate how the toolkit enables research beyond circuit synthesis, including comparison of synthesis and optimization methods and deeper understanding of even well-studied quantum algorithms. As quantum hardware continues to develop, such quantum circuit toolkits will play a critical role in realizing its potential.Comment: 49 pages, 25 figures, 20 table

QAmplifyNet: Pushing the Boundaries of Supply Chain Backorder Prediction Using Interpretable Hybrid Quantum - Classical Neural Network

Supply chain management relies on accurate backorder prediction for optimizing inventory control, reducing costs, and enhancing customer satisfaction. However, traditional machine-learning models struggle with large-scale datasets and complex relationships, hindering real-world data collection. This research introduces a novel methodological framework for supply chain backorder prediction, addressing the challenge of handling large datasets. Our proposed model, QAmplifyNet, employs quantum-inspired techniques within a quantum-classical neural network to predict backorders effectively on short and imbalanced datasets. Experimental evaluations on a benchmark dataset demonstrate QAmplifyNet's superiority over classical models, quantum ensembles, quantum neural networks, and deep reinforcement learning. Its proficiency in handling short, imbalanced datasets makes it an ideal solution for supply chain management. To enhance model interpretability, we use Explainable Artificial Intelligence techniques. Practical implications include improved inventory control, reduced backorders, and enhanced operational efficiency. QAmplifyNet seamlessly integrates into real-world supply chain management systems, enabling proactive decision-making and efficient resource allocation. Future work involves exploring additional quantum-inspired techniques, expanding the dataset, and investigating other supply chain applications. This research unlocks the potential of quantum computing in supply chain optimization and paves the way for further exploration of quantum-inspired machine learning models in supply chain management. Our framework and QAmplifyNet model offer a breakthrough approach to supply chain backorder prediction, providing superior performance and opening new avenues for leveraging quantum-inspired techniques in supply chain management

Psychophysiological modelling and the measurement of fear conditioning

Quantification of fear conditioning is paramount to many clinical and translational studies on aversive learning. Various measures of fear conditioning co-exist, including different observables and different methods of pre-processing. Here, we first argue that low measurement error is a rational desideratum for any measurement technique. We then show that measurement error can be approximated in benchmark experiments by how closely intended fear memory relates to measured fear memory, a quantity that we term retrodictive validity. From this perspective, we discuss different approaches commonly used to quantify fear conditioning. One of these is psychophysiological modelling (PsPM). This builds on a measurement model that describes how a psychological variable, such as fear memory, influences a physiological measure. This model is statistically inverted to estimate the most likely value of the psychological variable, given the measured data. We review existing PsPMs for skin conductance, pupil size, heart period, respiration, and startle eye-blink. We illustrate the benefit of PsPMs in terms of retrodictive validity and translate this into sample size required to achieve a desired level of statistical power. This sample size can differ up to a factor of three between different observables, and between the best, and the current standard, data pre-processing methods