LODE: Linking Digital Humanities Content to the Web of Data

Numerous digital humanities projects maintain their data collections in the form of text, images, and metadata. While data may be stored in many formats, from plain text to XML to relational databases, the use of the resource description framework (RDF) as a standardized representation has gained considerable traction during the last five years. Almost every digital humanities meeting has at least one session concerned with the topic of digital humanities, RDF, and linked data. While most existing work in linked data has focused on improving algorithms for entity matching, the aim of the LinkedHumanities project is to build digital humanities tools that work "out of the box," enabling their use by humanities scholars, computer scientists, librarians, and information scientists alike. With this paper, we report on the Linked Open Data Enhancer (LODE) framework developed as part of the LinkedHumanities project. With LODE we support non-technical users to enrich a local RDF repository with high-quality data from the Linked Open Data cloud. LODE links and enhances the local RDF repository without compromising the quality of the data. In particular, LODE supports the user in the enhancement and linking process by providing intuitive user-interfaces and by suggesting high-quality linking candidates using tailored matching algorithms. We hope that the LODE framework will be useful to digital humanities scholars complementing other digital humanities tools

Towards Exascale Scientific Metadata Management

Advances in technology and computing hardware are enabling scientists from all areas of science to produce massive amounts of data using large-scale simulations or observational facilities. In this era of data deluge, effective coordination between the data production and the analysis phases hinges on the availability of metadata that describe the scientific datasets. Existing workflow engines have been capturing a limited form of metadata to provide provenance information about the identity and lineage of the data. However, much of the data produced by simulations, experiments, and analyses still need to be annotated manually in an ad hoc manner by domain scientists. Systematic and transparent acquisition of rich metadata becomes a crucial prerequisite to sustain and accelerate the pace of scientific innovation. Yet, ubiquitous and domain-agnostic metadata management infrastructure that can meet the demands of extreme-scale science is notable by its absence. To address this gap in scientific data management research and practice, we present our vision for an integrated approach that (1) automatically captures and manipulates information-rich metadata while the data is being produced or analyzed and (2) stores metadata within each dataset to permeate metadata-oblivious processes and to query metadata through established and standardized data access interfaces. We motivate the need for the proposed integrated approach using applications from plasma physics, climate modeling and neuroscience, and then discuss research challenges and possible solutions

Quark: A High-Performance Secure Container Runtime for Serverless Computing

Secure container runtimes serve as the foundational layer for creating and running containers, which is the bedrock of emerging computing paradigms like microservices and serverless computing. Although existing secure container runtimes indeed enhance security via running containers over a guest kernel and a Virtual Machine Monitor (VMM or Hypervisor), they incur performance penalties in critical areas such as networking, container startup, and I/O system calls. In our practice of operating microservices and serverless computing, we build a high-performance secure container runtime named Quark. Unlike existing solutions that rely on traditional VM technologies by importing Linux for the guest kernel and QEMU for the VMM, we take a different approach to building Quark from the ground up, paving the way for extreme customization to unlock high performance. Our development centers on co-designing a custom guest kernel and a VMM for secure containers. To this end, we build a lightweight guest OS kernel named QKernel and a specialized VMM named QVisor. The QKernel-QVisor codesign allows us to deliver three key advancements: high-performance RDMA-based container networking, fast container startup mode, and efficient mechanisms for executing I/O syscalls. In our practice with real-world apps like Redis, Quark cuts down P95 latency by 79.3% and increases throughput by 2.43x compared to Kata. Moreover, Quark container startup achieves 96.5% lower latency than the cold-start mode while saving 81.3% memory cost to the keep-warm mode. Quark is open-source with an industry-standard codebase in Rust.Comment: arXiv admin note: text overlap with arXiv:2305.10621. The paper on arXiv:2305.10621 presents a detailed version of the TSoR module in Quar

The parallel event loop model and runtime: a parallel programming model and runtime system for safe event-based parallel programming

Recent trends in programming models for server-side development have shown an increasing popularity of event-based single- threaded programming models based on the combination of dynamic languages such as JavaScript and event-based runtime systems for asynchronous I/O management such as Node.JS. Reasons for the success of such models are the simplicity of the single-threaded event-based programming model as well as the growing popularity of the Cloud as a deployment platform for Web applications. Unfortunately, the popularity of single-threaded models comes at the price of performance and scalability, as single-threaded event-based models present limitations when parallel processing is needed, and traditional approaches to concurrency such as threads and locks don't play well with event-based systems. This dissertation proposes a programming model and a runtime system to overcome such limitations by enabling single-threaded event-based applications with support for speculative parallel execution. The model, called Parallel Event Loop, has the goal of bringing parallel execution to the domain of single-threaded event-based programming without relaxing the main characteristics of the single-threaded model, and therefore providing developers with the impression of a safe, single-threaded, runtime. Rather than supporting only pure single-threaded programming, however, the parallel event loop can also be used to derive safe, high-level, parallel programming models characterized by a strong compatibility with single-threaded runtimes. We describe three distinct implementations of speculative runtimes enabling the parallel execution of event-based applications. The first implementation we describe is a pessimistic runtime system based on locks to implement speculative parallelization. The second and the third implementations are based on two distinct optimistic runtimes using software transactional memory. Each of the implementations supports the parallelization of applications written using an asynchronous single-threaded programming style, and each of them enables applications to benefit from parallel execution

The parallel event loop model and runtime: a parallel programming model and runtime system for safe event-based parallel programming

Recent trends in programming models for server-side development have shown an increasing popularity of event-based single- threaded programming models based on the combination of dynamic languages such as JavaScript and event-based runtime systems for asynchronous I/O management such as Node.JS. Reasons for the success of such models are the simplicity of the single-threaded event-based programming model as well as the growing popularity of the Cloud as a deployment platform for Web applications. Unfortunately, the popularity of single-threaded models comes at the price of performance and scalability, as single-threaded event-based models present limitations when parallel processing is needed, and traditional approaches to concurrency such as threads and locks don't play well with event-based systems. This dissertation proposes a programming model and a runtime system to overcome such limitations by enabling single-threaded event-based applications with support for speculative parallel execution. The model, called Parallel Event Loop, has the goal of bringing parallel execution to the domain of single-threaded event-based programming without relaxing the main characteristics of the single-threaded model, and therefore providing developers with the impression of a safe, single-threaded, runtime. Rather than supporting only pure single-threaded programming, however, the parallel event loop can also be used to derive safe, high-level, parallel programming models characterized by a strong compatibility with single-threaded runtimes. We describe three distinct implementations of speculative runtimes enabling the parallel execution of event-based applications. The first implementation we describe is a pessimistic runtime system based on locks to implement speculative parallelization. The second and the third implementations are based on two distinct optimistic runtimes using software transactional memory. Each of the implementations supports the parallelization of applications written using an asynchronous single-threaded programming style, and each of them enables applications to benefit from parallel execution