Complexity, BioComplexity, the Connectionist Conjecture and Ontology of Complexity\ud

This paper develops and integrates major ideas and concepts on complexity and biocomplexity - the connectionist conjecture, universal ontology of complexity, irreducible complexity of totality & inherent randomness, perpetual evolution of information, emergence of criticality and equivalence of symmetry & complexity. This paper introduces the Connectionist Conjecture which states that the one and only representation of Totality is the connectionist one i.e. in terms of nodes and edges. This paper also introduces an idea of Universal Ontology of Complexity and develops concepts in that direction. The paper also develops ideas and concepts on the perpetual evolution of information, irreducibility and computability of totality, all in the context of the Connectionist Conjecture. The paper indicates that the control and communication are the prime functionals that are responsible for the symmetry and complexity of complex phenomenon. The paper takes the stand that the phenomenon of life (including its evolution) is probably the nearest to what we can describe with the term “complexity”. The paper also assumes that signaling and communication within the living world and of the living world with the environment creates the connectionist structure of the biocomplexity. With life and its evolution as the substrate, the paper develops ideas towards the ontology of complexity. The paper introduces new complexity theoretic interpretations of fundamental biomolecular parameters. The paper also develops ideas on the methodology to determine the complexity of “true” complex phenomena.\u

An Overview of Models for Response Times and Processes in Cognitive Tests.

Response times (RTs) are a natural kind of data to investigate cognitive processes underlying cognitive test performance. We give an overview of modeling approaches and of findings obtained with these approaches. Four types of models are discussed: response time models (RT as the sole dependent variable), joint models (RT together with other variables as dependent variable), local dependency models (with remaining dependencies between RT and accuracy), and response time as covariate models (RT as independent variable). The evidence from these approaches is often not very informative about the specific kind of processes (other than problem solving, information accumulation, and rapid guessing), but the findings do suggest dual processing: automated processing (e.g., knowledge retrieval) vs. controlled processing (e.g., sequential reasoning steps), and alternative explanations for the same results exist. While it seems well-possible to differentiate rapid guessing from normal problem solving (which can be based on automated or controlled processing), further decompositions of response times are rarely made, although possible based on some of model approaches

Distributed Bayesian Matrix Factorization with Limited Communication

Bayesian matrix factorization (BMF) is a powerful tool for producing low-rank representations of matrices and for predicting missing values and providing confidence intervals. Scaling up the posterior inference for massive-scale matrices is challenging and requires distributing both data and computation over many workers, making communication the main computational bottleneck. Embarrassingly parallel inference would remove the communication needed, by using completely independent computations on different data subsets, but it suffers from the inherent unidentifiability of BMF solutions. We introduce a hierarchical decomposition of the joint posterior distribution, which couples the subset inferences, allowing for embarrassingly parallel computations in a sequence of at most three stages. Using an efficient approximate implementation, we show improvements empirically on both real and simulated data. Our distributed approach is able to achieve a speed-up of almost an order of magnitude over the full posterior, with a negligible effect on predictive accuracy. Our method outperforms state-of-the-art embarrassingly parallel MCMC methods in accuracy, and achieves results competitive to other available distributed and parallel implementations of BMF.Comment: 28 pages, 8 figures. The paper is published in Machine Learning journal. An implementation of the method is is available in SMURFF software on github (bmfpp branch): https://github.com/ExaScience/smurf

Reason Maintenance - State of the Art

This paper describes state of the art in reason maintenance with a focus on its future usage in the KiWi project. To give a bigger picture of the field, it also mentions closely related issues such as non-monotonic logic and paraconsistency. The paper is organized as follows: first, two motivating scenarios referring to semantic wikis are presented which are then used to introduce the different reason maintenance techniques

Uncertainty explicit assessment of off-the-shelf software: A Bayesian approach

Assessment of software COTS components is an essential part of component-based software development. Poorly chosen components may lead to solutions of low quality and that are difficult to maintain. The assessment may be based on incomplete knowledge about the COTS component itself and other aspects (e.g. vendor’s credentials, etc.), which may affect the decision of selecting COTS component(s). We argue in favor of assessment methods in which uncertainty is explicitly represented (‘uncertainty explicit’ methods) using probability distributions. We provide details of a Bayesian model, which can be used to capture the uncertainties in the simultaneous assessment of two attributes, thus, also capturing the dependencies that might exist between them. We also provide empirical data from the use of this method for the assessment of off-the-shelf database servers which illustrate the advantages of ‘uncertainty explicit’ methods over conventional methods of COTS component assessment which assume that at the end of the assessment the values of the attributes become known with certainty

A decision support system to improve service quality in multimodal rapid rail systems: A bayesian perspective

Copyright @ 2011 International Conference on Computers and Industrial EngineeringIn this study, the accessibility of the rail transit stations in a multimodal network formed by a trunk line and its feeder lines are defined. Connectivity between lines and the accessibility of the nodes identify the overall spatial structure of the network. The factors influencing the access choices of rail transit stations and satisfaction of transit travelers in rapid rail transit systems are investigated in order to gain insights into the factors and their interrelationships. The quantitative indications of the relationships are produced and the complexity of evaluating the performance of transit services is exhibited. As the interrelationships are mainly stochastic, the problem on hand is treated as a Bayesian Belief Network (BBN). A BBN approach that presents a learning mechanism is employed and is used as an alternative decision making tool to analyze the rapid rail transit services and identify policies to improve the traveler’s level of service

The Problem of Analogical Inference in Inductive Logic

We consider one problem that was largely left open by Rudolf Carnap in his work on inductive logic, the problem of analogical inference. After discussing some previous attempts to solve this problem, we propose a new solution that is based on the ideas of Bruno de Finetti on probabilistic symmetries. We explain how our new inductive logic can be developed within the Carnapian paradigm of inductive logic-deriving an inductive rule from a set of simple postulates about the observational process-and discuss some of its properties.Comment: In Proceedings TARK 2015, arXiv:1606.0729