496 research outputs found
A Survey on Deep Learning in Medical Image Analysis
Deep learning algorithms, in particular convolutional networks, have rapidly
become a methodology of choice for analyzing medical images. This paper reviews
the major deep learning concepts pertinent to medical image analysis and
summarizes over 300 contributions to the field, most of which appeared in the
last year. We survey the use of deep learning for image classification, object
detection, segmentation, registration, and other tasks and provide concise
overviews of studies per application area. Open challenges and directions for
future research are discussed.Comment: Revised survey includes expanded discussion section and reworked
introductory section on common deep architectures. Added missed papers from
before Feb 1st 201
Applications of Deep Learning Techniques for Automated Multiple Sclerosis Detection Using Magnetic Resonance Imaging: A Review
Multiple Sclerosis (MS) is a type of brain disease which causes visual, sensory, and motor problems for people with a detrimental effect on the functioning of the nervous system. In order to diagnose MS, multiple screening methods have been proposed so far; among them, magnetic resonance imaging (MRI) has received considerable attention among physicians. MRI modalities provide physicians with fundamental information about the structure and function of the brain, which is crucial for the rapid diagnosis of MS lesions. Diagnosing MS using MRI is time-consuming, tedious, and prone to manual errors. Research on the implementation of computer aided diagnosis system (CADS) based on artificial intelligence (AI) to diagnose MS involves conventional machine learning and deep learning (DL) methods. In conventional machine learning, feature extraction, feature selection, and classification steps are carried out by using trial and error; on the contrary, these steps in DL are based on deep layers whose values are automatically learn. In this paper, a complete review of automated MS diagnosis methods performed using DL techniques with MRI neuroimaging modalities is provided. Initially, the steps involved in various CADS proposed using MRI modalities and DL techniques for MS diagnosis are investigated. The important preprocessing techniques employed in various works are analyzed. Most of the published papers on MS diagnosis using MRI modalities and DL are presented. The most significant challenges facing and future direction of automated diagnosis of MS using MRI modalities and DL techniques are also provided
Attention Gated Networks: Learning to Leverage Salient Regions in Medical Images
We propose a novel attention gate (AG) model for medical image analysis that
automatically learns to focus on target structures of varying shapes and sizes.
Models trained with AGs implicitly learn to suppress irrelevant regions in an
input image while highlighting salient features useful for a specific task.
This enables us to eliminate the necessity of using explicit external
tissue/organ localisation modules when using convolutional neural networks
(CNNs). AGs can be easily integrated into standard CNN models such as VGG or
U-Net architectures with minimal computational overhead while increasing the
model sensitivity and prediction accuracy. The proposed AG models are evaluated
on a variety of tasks, including medical image classification and segmentation.
For classification, we demonstrate the use case of AGs in scan plane detection
for fetal ultrasound screening. We show that the proposed attention mechanism
can provide efficient object localisation while improving the overall
prediction performance by reducing false positives. For segmentation, the
proposed architecture is evaluated on two large 3D CT abdominal datasets with
manual annotations for multiple organs. Experimental results show that AG
models consistently improve the prediction performance of the base
architectures across different datasets and training sizes while preserving
computational efficiency. Moreover, AGs guide the model activations to be
focused around salient regions, which provides better insights into how model
predictions are made. The source code for the proposed AG models is publicly
available.Comment: Accepted for Medical Image Analysis (Special Issue on Medical Imaging
with Deep Learning). arXiv admin note: substantial text overlap with
arXiv:1804.03999, arXiv:1804.0533
3D Deep Learning on Medical Images: A Review
The rapid advancements in machine learning, graphics processing technologies
and availability of medical imaging data has led to a rapid increase in use of
deep learning models in the medical domain. This was exacerbated by the rapid
advancements in convolutional neural network (CNN) based architectures, which
were adopted by the medical imaging community to assist clinicians in disease
diagnosis. Since the grand success of AlexNet in 2012, CNNs have been
increasingly used in medical image analysis to improve the efficiency of human
clinicians. In recent years, three-dimensional (3D) CNNs have been employed for
analysis of medical images. In this paper, we trace the history of how the 3D
CNN was developed from its machine learning roots, give a brief mathematical
description of 3D CNN and the preprocessing steps required for medical images
before feeding them to 3D CNNs. We review the significant research in the field
of 3D medical imaging analysis using 3D CNNs (and its variants) in different
medical areas such as classification, segmentation, detection, and
localization. We conclude by discussing the challenges associated with the use
of 3D CNNs in the medical imaging domain (and the use of deep learning models,
in general) and possible future trends in the field.Comment: 13 pages, 4 figures, 2 table
Transfer learning for Alzheimer’s disease through neuroimaging biomarkers: A systematic review
Producción CientíficaAlzheimer’s disease (AD) is a remarkable challenge for healthcare in the 21st century. Since 2017, deep learning models with transfer learning approaches have been gaining recognition in AD detection, and progression prediction by using neuroimaging biomarkers. This paper presents a systematic review of the current state of early AD detection by using deep learning models with transfer learning and neuroimaging biomarkers. Five databases were used and the results before screening report 215 studies published between 2010 and 2020. After screening, 13 studies met the inclusion criteria. We noted that the maximum accuracy achieved to date for AD classification is 98.20% by using the combination of 3D convolutional networks and local transfer learning, and that for the prognostic prediction of AD is 87.78% by using pre-trained 3D convolutional network-based architectures. The results show that transfer learning helps researchers in developing a more accurate system for the early diagnosis of AD. However, there is a need to consider some points in future research, such as improving the accuracy of the prognostic prediction of AD, exploring additional biomarkers such as tau-PET and amyloid-PET to understand highly discriminative feature representation to separate similar brain patterns, managing the size of the datasets due to the limited availability.Ministerio de Industria, Energía y Turismo (AAL-20125036
Alzheimer’s And Parkinson’s Disease Classification Using Deep Learning Based On MRI: A Review
Neurodegenerative disorders present a current challenge for accurate diagnosis and for providing precise prognostic information. Alzheimer’s disease (AD) and Parkinson's disease (PD), may take several years to obtain a definitive diagnosis. Due to the increased aging population in developed countries, neurodegenerative diseases such as AD and PD have become more prevalent and thus new technologies and more accurate tests are needed to improve and accelerate the diagnostic procedure in the early stages of these diseases. Deep learning has shown significant promise in computer-assisted AD and PD diagnosis based on MRI with the widespread use of artificial intelligence in the medical domain. This article analyses and evaluates the effectiveness of existing Deep learning (DL)-based approaches to identify neurological illnesses using MRI data obtained using various modalities, including functional and structural MRI. Several current research issues are identified toward the conclusion, along with several potential future study directions
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