ToScA North America (6 – 8 June 2017, The University of Texas, Austin, TX) Program

ToScA North America will address key areas of science, including Multi-modal Imaging, Geosciences, Forensics, Increasing Contrast, Educational Outreach, Data, Materials Science and Medical and Biological Science.University of Texas High-Resolution X-ray CT Facility (UTCT); Jackson School of Geosciences, The University of Texas at Austin; Natural History Museum (London); Royal Microscopical Society (Oxford, UK)Geological Science

Radial Velocity Prospects Current and Future: A White Paper Report prepared by the Study Analysis Group 8 for the Exoplanet Program Analysis Group (ExoPAG)

[Abridged] The Study Analysis Group 8 of the NASA Exoplanet Analysis Group was convened to assess the current capabilities and the future potential of the precise radial velocity (PRV) method to advance the NASA goal to "search for planetary bodies and Earth-like planets in orbit around other stars.: (U.S. National Space Policy, June 28, 2010). PRVs complement other exoplanet detection methods, for example offering a direct path to obtaining the bulk density and thus the structure and composition of transiting exoplanets. Our analysis builds upon previous community input, including the ExoPlanet Community Report chapter on radial velocities in 2008, the 2010 Decadal Survey of Astronomy, the Penn State Precise Radial Velocities Workshop response to the Decadal Survey in 2010, and the NSF Portfolio Review in 2012. The radial-velocity detection of exoplanets is strongly endorsed by both the Astro 2010 Decadal Survey "New Worlds, New Horizons" and the NSF Portfolio Review, and the community has recommended robust investment in PRVs. The demands on telescope time for the above mission support, especially for systems of small planets, will exceed the number of nights available using instruments now in operation by a factor of at least several for TESS alone. Pushing down towards true Earth twins will require more photons (i.e. larger telescopes), more stable spectrographs than are currently available, better calibration, and better correction for stellar jitter. We outline four hypothetical situations for PRV work necessary to meet NASA mission exoplanet science objectives.Comment: ExoPAG SAG 8 final report, 112 pages, fixed author name onl

Synthesis and Characterization of New Probes for use in Fluorescence and X-ray CT Bioimaging

The pursuit of more suitable drugs intended for possible biological applications are a continuously growing topic of research within the scientific community. One of these suitable qualities includes the need for hydrophilicity and or some appropriate delivery system for the drug to enter into biological systems. A system of analyzing and following these compounds would then, however, be necessary to conduct any kind of mechanistic or interaction studies for he said drug within the biological system. Just to name a few, fluorescence and X-ray computed tomography (CT) methods allow for imaging of biological systems but require the need of compounds with specific qualities. Finally, even with a means of entering and following a oaded drug, it would not be complete without a way of targeting its intended location. Herein, the first chapter reports the synthesis and characterization of a fluorene-based pyridil bis-?-diketone compound with suitable one- and two-photon fluorescent properties and its encapsulation into Pluronic F127 micelles for the possible application of tracking lysosomes. Next the synthesis and characterization of a BODIPY-based fluorophore with excellent fluorescence ability is reported. This compound was conjugated to two triphenylphosphine (TPP) groups and is shown as a potential mitochondria probe within HCT-116 cells. Finally, the synthesis and characterization of diatrizoic acid (DA) based derivatives conjugated to silica nanoparticles, as well as unconjugated, are reported as potential CT contrast agents. The derivatives were also functionalized with maleimide moieties facilitating subsequent potential bioconjugation of a targeting protein via a thiol group

Extracting Information from Adaptive Control Experiments

Optical control of chemical reactivity is achieved through the use of photonic reagents, that is, “shaped” ultrafast optical pulses created using a pulse shaper. It has been demonstrated in a number of molecular systems that these pulses can effectively guide the system into a desired final state. Effective pulses are often found through an experimental search involving thousands of individual measurements. An examination of the pulses tested in these experiments can reveal the pulse features responsible for control and also the underlying molecular dynamics. In this article we review attempts to extract information from optical control experiments using adaptive learning algorithms to search the available parameter space, and we discuss how these kinds of experiments can be used to achieve and understand multiphoton optical control.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/91361/1/397_ftp.pd

Coherent Control of Multiphoton Transitions in the Gas and Condensed Phases with Shaped Ultrashort Pulses

Controlling laser-molecule interactions has become an integral part of developing devices and applications in spectroscopy, microscopy, optical switching, micromachining and photochemistry. Coherent control of multiphoton transitions could bring a significant improvement of these methods. In microscopy, multi-photon transitions are used to activate different contrast agents and suppress background fluorescence; coherent control could generate selective probe excitation. In photochemistry, different dissociative states are accessed through two, three, or more photon transitions; coherent control could be used to select the reaction pathway and therefore the yield-specific products. For micromachining and processing a wide variety of materials, femtosecond lasers are now used routinely. Understanding the interactions between the intense femtosecond pulse and the material could lead to technologically important advances. Pulse shaping could then be used to optimize the desired outcome. The scope of our research program is to develop robust and efficient strategies to control nonlinear laser-matter interactions using ultrashort shaped pulses in gas and condensed phases. Our systematic research has led to significant developments in a number of areas relevant to the AMO Physics group at DOE, among them: generation of ultrashort phase shaped pulses, coherent control and manipulation of quantum mechanical states in gas and condensed phases, behavior of isolated molecules under intense laser fields, behavior of condensed phase matter under intense laser field and implications on micromachining with ultrashort pulses, coherent control of nanoparticles their surface plasmon waves and their nonlinear optical behavior, and observation of coherent Coulomb explosion processes at 10^16 W/cm^2. In all, the research has resulted in 36 publications (five journal covers) and nine invention disclosures, five of which have continued on to patentin

Ultraviolet sources for advanced applications in the vacuum UV and near UV

This dissertation documents a systematic study consisting of experimental investigations and theoretical analyses of intense ultraviolet sources in VUV and near-UV. Some engineering issues regarding two prototypes of electrodeless lamps using rf and microwave are discussed.;Various excimers that produce intense UV light are investigated, including: (1) A benchmark Xe2 excimer which has been proven to be very efficient in our novel rf capacitively coupled discharge lamp; (2) A rarely studied excimer, KrI, which suffers from predissociation and was reported to be very weak or invisible by most of other studies; (3) XeI excimer whose emission dominates around 253 nm and is promising as a mercury-free lamp for antibacterial applications. In the above studies, discharge temperatures are estimated from the emission band width. An elaborate kinetic model is developed for KrI to account for the KrI* and I2* intensities as a function of pressure. It was found that Kr2* plays the rule for energy transfer instead of Kr* in the pressure of interest. The electromagnetic wave interaction with charge particles is studied in our 2D and 3D EM-PIC simulations for both the rf and microwave lamps. Important plasma parameters, such as the electron density and temperature are obtained for various pressures. The electron energy distribution function that is important to account for excimer excitation is obtained.;We also performed a high-level ab initio calculation in Gaussian to produce the ground state potential curve for KrI, which agrees with previous scattering experiments and is necessary for predicting spectral emissions. as a systematic study to account for the KrI emission spectra at high pressure, we use a semiclassical model to account for emissions between a bound excited state and an unbound ground state. An explicit expression is obtained to represent the observed spectral intensity. Important molecular constants are obtained for KrI and compared with previous results

Selection and Evaluation of a Silver Nanoparticle Imaging Agent for Dual-Energy Mammography

Over the past decade, contrast-enhanced (CE) dual-energy (DE) x-ray breast imaging has emerged as an exciting, new modality to provide high quality anatomic and functional information of the breast. The combination of these data in a single imaging procedure represents a powerful tool for the detection and diagnosis of breast cancer. The most widely used implementation of CEDE imaging is k-edge imaging, whereby two x-ray spectra are placed on either side of the k-edge of the contrast material. Currently, CEDE imaging is performed with iodinated contrast agents. The lower energies used in clinical DE breast imaging systems compared to imaging systems for other organs suggest that an alternative material may be better suited. We developed an analytical model to compare the contrast of various elements in the periodic table. The model predicts that materials with atomic numbers from 42 to 52 should provide the best contrast in DE breast imaging while still providing high-quality anatomical images. Upon consideration, silver was chosen for more detailed study. Through simulation and experimental validation, we determined that not only does silver perform better than iodine when imaged at their respective optimal conditions, but silver is able to provide higher levels of contrast than iodine when imaged with current protocols that are optimal for iodine. Therefore, a silver agent could be translated to the clinic without modification of existing imaging systems or techniques. A prototype silver agent was designed. The agent consists of (i) a silver core for DE contrast, (ii) a silica shell to prevent the release of toxic silver cations, and (iii) a polyethylene glycol layer to improve the biocompatibility of the entire nanostructure. DE imaging with the particles showed a 9-fold increase in contrast when injected into mice, while displaying no acutely toxic effects. The prototype silica-silver nanoparticles represent a first step in developing a biologically stable contrast agent that is specifically suited for DE breast imaging

Metabolism and Physiology of Halobacteria

Halophiles (lat. “salt-loving”) is the taxonomic group of extreme aerobic microorganisms that live in conditions of high salinity – in the seas, salt lakes, saline soils etc. These microorganisms are known to reddish patina on products, preserved with using large quantities of salt (NaCl). Halophiles were isolated for the first time at the beginning of the XX century from the marine flora estuary mud, but their systematic study was started only at the end of the second decade of the XX century. The internal environment of the human body is not suitable for existence of halobacteria, since none of them are known to have pathogenic forms. Halobacteria have great practical potential for using in molecular bioelectronics and bio-nanotechnology due to their unique ability to convert the energy of sunlight into electrochemical energy of protons H+ due to the presence in their cells a special photo transforming retinal containing integral protein – bacteriorhodopsin, the mechanism of action of which has been currently studied in detail. This article describes the characteristics of the metabolism and physiology of halophilic bacteria, as well as a method of biosynthesis and preparation of bacteriorhodopsin from purple membranes of cells of the extreme photoorganotrophic halobacterium Halobacterium halobium. Key words: halobacteria, bacteriorhodopsin, purple membranes, biosynthesis

Metabolism, Physiology And Biotechnological Applications of Halobacteria

Halophiles (lat. “salt-loving”) is the taxonomic group of extreme aerobic microorganisms that live in conditions of high salinity – in the seas, salt lakes, saline soils etc. These microorganisms are known to reddish patina on products, preserved with using large quantities of salt (NaCl). Halophiles were isolated for the first time at the beginning of the XX century from the marine flora estuary mud, but their systematic study was started only at the end of the second decade of the XX century. The internal environment of the human body is not suitable for existence of halobacteria, since none of them are known to have pathogenic forms. Halobacteria have great practical potential for using in molecular bioelectronics and bio-nanotechnology due to their unique ability to convert the energy of sunlight into electrochemical energy of protons H+ due to the presence in their cells a special photo transforming retinal containing integral protein – bacteriorhodopsin, the mechanism of action of which has been currently studied in detail. This article describes the characteristics of the metabolism and physiology of halophilic bacteria, as well as a method of biosynthesis and preparation of bacteriorhodopsin from purple membranes of cells of the extreme photoorganotrophic halobacterium Halobacterium halobium. Key words: halobacteria, bacteriorhodopsin, purple membranes, biosynthesis.