Linear Time Subgraph Counting, Graph Degeneracy, and the Chasm at Size Six

We consider the problem of counting all k-vertex subgraphs in an input graph, for any constant k. This problem (denoted SUB-CNT_k) has been studied extensively in both theory and practice. In a classic result, Chiba and Nishizeki (SICOMP 85) gave linear time algorithms for clique and 4-cycle counting for bounded degeneracy graphs. This is a rich class of sparse graphs that contains, for example, all minor-free families and preferential attachment graphs. The techniques from this result have inspired a number of recent practical algorithms for SUB-CNT_k. Towards a better understanding of the limits of these techniques, we ask: for what values of k can SUB_CNT_k be solved in linear time? We discover a chasm at k=6. Specifically, we prove that for k < 6, SUB_CNT_k can be solved in linear time. Assuming a standard conjecture in fine-grained complexity, we prove that for all k ? 6, SUB-CNT_k cannot be solved even in near-linear time

Enumerating Subgraph Instances Using Map-Reduce

The theme of this paper is how to find all instances of a given "sample" graph in a larger "data graph," using a single round of map-reduce. For the simplest sample graph, the triangle, we improve upon the best known such algorithm. We then examine the general case, considering both the communication cost between mappers and reducers and the total computation cost at the reducers. To minimize communication cost, we exploit the techniques of (Afrati and Ullman, TKDE 2011)for computing multiway joins (evaluating conjunctive queries) in a single map-reduce round. Several methods are shown for translating sample graphs into a union of conjunctive queries with as few queries as possible. We also address the matter of optimizing computation cost. Many serial algorithms are shown to be "convertible," in the sense that it is possible to partition the data graph, explore each partition in a separate reducer, and have the total computation cost at the reducers be of the same order as the computation cost of the serial algorithm.Comment: 37 page

Enumerating Polytropes

Polytropes are both ordinary and tropical polytopes. We show that tropical types of polytropes in $\mathbb{TP}^{n-1}$ are in bijection with cones of a certain Gr\"{o}bner fan $\mathcal{GF}_n$ in $\mathbb{R}^{n^2 - n}$ restricted to a small cone called the polytrope region. These in turn are indexed by compatible sets of bipartite and triangle binomials. Geometrically, on the polytrope region, $\mathcal{GF}_n$ is the refinement of two fans: the fan of linearity of the polytrope map appeared in \cite{tran.combi}, and the bipartite binomial fan. This gives two algorithms for enumerating tropical types of polytropes: one via a general Gr\"obner fan software such as \textsf{gfan}, and another via checking compatibility of systems of bipartite and triangle binomials. We use these algorithms to compute types of full-dimensional polytropes for $n = 4$, and maximal polytropes for $n = 5$.Comment: Improved exposition, fixed error in reporting the number maximal polytropes for $n = 6$, fixed error in definition of bipartite binomial

Counting Triangulations and other Crossing-Free Structures Approximately

We consider the problem of counting straight-edge triangulations of a given set $P$ of $n$ points in the plane. Until very recently it was not known whether the exact number of triangulations of $P$ can be computed asymptotically faster than by enumerating all triangulations. We now know that the number of triangulations of $P$ can be computed in $O^{*}(2^{n})$ time, which is less than the lower bound of $\Omega(2.43^{n})$ on the number of triangulations of any point set. In this paper we address the question of whether one can approximately count triangulations in sub-exponential time. We present an algorithm with sub-exponential running time and sub-exponential approximation ratio, that is, denoting by $\Lambda$ the output of our algorithm, and by $c^{n}$ the exact number of triangulations of $P$, for some positive constant $c$, we prove that $c^{n}\leq\Lambda\leq c^{n}\cdot 2^{o(n)}$. This is the first algorithm that in sub-exponential time computes a $(1+o(1))$-approximation of the base of the number of triangulations, more precisely, $c\leq\Lambda^{\frac{1}{n}}\leq(1 + o(1))c$. Our algorithm can be adapted to approximately count other crossing-free structures on $P$, keeping the quality of approximation and running time intact. In this paper we show how to do this for matchings and spanning trees.Comment: 19 pages, 2 figures. A preliminary version appeared at CCCG 201

Parametric shortest-path algorithms via tropical geometry

We study parameterized versions of classical algorithms for computing shortest-path trees. This is most easily expressed in terms of tropical geometry. Applications include shortest paths in traffic networks with variable link travel times.Comment: 24 pages and 8 figure

Simplicial and Cellular Trees

Much information about a graph can be obtained by studying its spanning trees. On the other hand, a graph can be regarded as a 1-dimensional cell complex, raising the question of developing a theory of trees in higher dimension. As observed first by Bolker, Kalai and Adin, and more recently by numerous authors, the fundamental topological properties of a tree --- namely acyclicity and connectedness --- can be generalized to arbitrary dimension as the vanishing of certain cellular homology groups. This point of view is consistent with the matroid-theoretic approach to graphs, and yields higher-dimensional analogues of classical enumerative results including Cayley's formula and the matrix-tree theorem. A subtlety of the higher-dimensional case is that enumeration must account for the possibility of torsion homology in trees, which is always trivial for graphs. Cellular trees are the starting point for further high-dimensional extensions of concepts from algebraic graph theory including the critical group, cut and flow spaces, and discrete dynamical systems such as the abelian sandpile model.Comment: 39 pages (including 5-page bibliography); 5 figures. Chapter for forthcoming IMA volume "Recent Trends in Combinatorics