20 research outputs found
Efficient Ultrasound Image Analysis Models with Sonographer Gaze Assisted Distillation.
Recent automated medical image analysis methods have attained state-of-the-art performance but have relied on memory and compute-intensive deep learning models. Reducing model size without significant loss in performance metrics is crucial for time and memory-efficient automated image-based decision-making. Traditional deep learning based image analysis only uses expert knowledge in the form of manual annotations. Recently, there has been interest in introducing other forms of expert knowledge into deep learning architecture design. This is the approach considered in the paper where we propose to combine ultrasound video with point-of-gaze tracked for expert sonographers as they scan to train memory-efficient ultrasound image analysis models. Specifically we develop teacher-student knowledge transfer models for the exemplar task of frame classification for the fetal abdomen, head, and femur. The best performing memory-efficient models attain performance within 5% of conventional models that are 1000× larger in size
Cross-Task Representation Learning for Anatomical Landmark Detection
Recently, there is an increasing demand for automatically detecting
anatomical landmarks which provide rich structural information to facilitate
subsequent medical image analysis. Current methods related to this task often
leverage the power of deep neural networks, while a major challenge in fine
tuning such models in medical applications arises from insufficient number of
labeled samples. To address this, we propose to regularize the knowledge
transfer across source and target tasks through cross-task representation
learning. The proposed method is demonstrated for extracting facial anatomical
landmarks which facilitate the diagnosis of fetal alcohol syndrome. The source
and target tasks in this work are face recognition and landmark detection,
respectively. The main idea of the proposed method is to retain the feature
representations of the source model on the target task data, and to leverage
them as an additional source of supervisory signals for regularizing the target
model learning, thereby improving its performance under limited training
samples. Concretely, we present two approaches for the proposed representation
learning by constraining either final or intermediate model features on the
target model. Experimental results on a clinical face image dataset demonstrate
that the proposed approach works well with few labeled data, and outperforms
other compared approaches.Comment: MICCAI-MLMI 202
Machine learning for outlier detection in medical imaging
Outlier detection is an important problem with diverse practical applications. In medical imaging, there are many diagnostic tasks that can be framed as outlier detection. Since pathologies can manifest in so many different ways, the goal is typically to learn from normal, healthy data and identify any deviations. Unfortunately, many outliers in the medical domain can be subtle and specific, making them difficult to detect without labelled examples. This thesis analyzes some of the nuances of medical data and the value of labels in this context. It goes on to propose several strategies for unsupervised learning. More specifically, these methods are designed to learn discriminative features from data of a single class. One approach uses divergent search to continually find different ways to partition the data and thereby accumulates a repertoire of features. The other proposed methods are based on a self-supervised task that distorts normal data to form a contrasting class. A network can then be trained to localize the irregularities and estimate the degree of foreign interference. This basic technique is further enhanced using advanced image editing to create more natural irregularities. Lastly, the same self-supervised task is repurposed for few-shot learning to create a framework for adaptive outlier detection. These proposed methods are able to outperform conventional strategies across a range of datasets including brain MRI, abdominal CT, chest X-ray, and fetal ultrasound data. In particular, these methods excel at detecting more subtle irregularities. This complements existing methods and aims to maximize benefit to clinicians by detecting fine-grained anomalies that can otherwise require intense scrutiny. Note that all approaches to outlier detection must accept some assumptions; these will affect which types of outliers can be detected. As such, these methods aim for broad generalization within the most medically relevant categories. Ultimately, the hope is to support clinicians and to focus their attention and efforts on the data that warrants further analysis.Open Acces
Scholarship is not just research : Nurturing scholarship in health professions education
Peer reviewe
The Global Health Equity Clinical Immersion (HECI); An Innovation in Remote International Placements
Digital assessment in the clinical workplace : Design, implementation, opportunities, challenges
Peer reviewe