Incremental Distance Transforms (IDT)

A new generic scheme for incremental implementations of distance transforms (DT) is presented: Incremental Distance Transforms (IDT). This scheme is applied on the cityblock, Chamfer, and three recent exact Euclidean DT (E2DT). A benchmark shows that for all five DT, the incremental implementation results in a significant speedup: 3.4×−10×. However, significant differences (i.e., up to 12.5×) among the DT remain present. The FEED transform, one of the recent E2DT, even showed to be faster than both city-block and Chamfer DT. So, through a very efficient incremental processing scheme for DT, a relief is found for E2DT’s computational burden

Synthetic 3D Pap smear nucleus generation

Gómez Aguilar, S. (2010). Synthetic 3D Pap smear nucleus generation. http://hdl.handle.net/10251/10215.Archivo delegad

Efficient Irregular Wavefront Propagation Algorithms on Hybrid CPU-GPU Machines

In this paper, we address the problem of efficient execution of a computation pattern, referred to here as the irregular wavefront propagation pattern (IWPP), on hybrid systems with multiple CPUs and GPUs. The IWPP is common in several image processing operations. In the IWPP, data elements in the wavefront propagate waves to their neighboring elements on a grid if a propagation condition is satisfied. Elements receiving the propagated waves become part of the wavefront. This pattern results in irregular data accesses and computations. We develop and evaluate strategies for efficient computation and propagation of wavefronts using a multi-level queue structure. This queue structure improves the utilization of fast memories in a GPU and reduces synchronization overheads. We also develop a tile-based parallelization strategy to support execution on multiple CPUs and GPUs. We evaluate our approaches on a state-of-the-art GPU accelerated machine (equipped with 3 GPUs and 2 multicore CPUs) using the IWPP implementations of two widely used image processing operations: morphological reconstruction and euclidean distance transform. Our results show significant performance improvements on GPUs. The use of multiple CPUs and GPUs cooperatively attains speedups of 50x and 85x with respect to single core CPU executions for morphological reconstruction and euclidean distance transform, respectively.Comment: 37 pages, 16 figure

Optimal Separable Algorithms to Compute the Reverse Euclidean Distance Transformation and Discrete Medial Axis in Arbitrary Dimension

In binary images, the distance transformation (DT) and the geometrical skeleton extraction are classic tools for shape analysis. In this paper, we present time optimal algorithms to solve the reverse Euclidean distance transformation and the reversible medial axis extraction problems for $d$-dimensional images. We also present a $d$-dimensional medial axis filtering process that allows us to control the quality of the reconstructed shape

Continuous Multiclass Labeling Approaches and Algorithms

We study convex relaxations of the image labeling problem on a continuous domain with regularizers based on metric interaction potentials. The generic framework ensures existence of minimizers and covers a wide range of relaxations of the originally combinatorial problem. We focus on two specific relaxations that differ in flexibility and simplicity -- one can be used to tightly relax any metric interaction potential, while the other one only covers Euclidean metrics but requires less computational effort. For solving the nonsmooth discretized problem, we propose a globally convergent Douglas-Rachford scheme, and show that a sequence of dual iterates can be recovered in order to provide a posteriori optimality bounds. In a quantitative comparison to two other first-order methods, the approach shows competitive performance on synthetical and real-world images. By combining the method with an improved binarization technique for nonstandard potentials, we were able to routinely recover discrete solutions within 1%--5% of the global optimum for the combinatorial image labeling problem