Automatic artifacts removal from epileptic EEG using a hybrid algorithm

Electroencephalogram (EEG) examination plays a very important role in the diagnosis of disorders related to epilepsy in clinic. However, epileptic EEG is often contaminated with lots of artifacts such as electrocardiogram (ECG), electromyogram (EMG) and electrooculogram (EOG). These artifacts confuse EEG interpretation, while rejecting EEG segments containing artifacts probably results in a substantial data loss and it is very time-consuming. The purpose of this study is to develop a novel algorithm for removing artifacts from epileptic EEG automatically. The collected multi-channel EEG data are decomposed into statistically independent components with Independent Component Analysis (ICA). Then temporal and spectral features of each independent component, including Hurst exponent, skewness, kurtosis, largest Lyapunov exponent and frequency-band energy extracted with wavelet packet decomposition, are calculated to quantify the characteristics of different artifact components. These features are imported into trained support vector machine to determine whether the independent components represent EEG activity or artifactual signals. Finally artifact-free EEGs are obtained by reconstructing the signal with artifact-free components. The method is evaluated with EEG recordings acquired from 15 epilepsy patients. Compared with previous work, the proposed method can remove artifacts such as baseline drift, ECG, EMG, EOG, and power frequency interference automatically and efficiently, while retaining important features for epilepsy diagnosis such as interictal spikes and ictal segments

Motion Artifact Processing Techniques for Physiological Signals

The combination of reducing birth rate and increasing life expectancy continues to drive the demographic shift toward an ageing population and this is placing an ever-increasing burden on our healthcare systems. The urgent need to address this so called healthcare \time bomb" has led to a rapid growth in research into ubiquitous, pervasive and distributed healthcare technologies where recent advances in signal acquisition, data storage and communication are helping such systems become a reality. However, similar to recordings performed in the hospital environment, artifacts continue to be a major issue for these systems. The magnitude and frequency of artifacts can vary signicantly depending on the recording environment with one of the major contributions due to the motion of the subject or the recording transducer. As such, this thesis addresses the challenges of the removal of this motion artifact removal from various physiological signals. The preliminary investigations focus on artifact identication and the tagging of physiological signals streams with measures of signal quality. A new method for quantifying signal quality is developed based on the use of inexpensive accelerometers which facilitates the appropriate use of artifact processing methods as needed. These artifact processing methods are thoroughly examined as part of a comprehensive review of the most commonly applicable methods. This review forms the basis for the comparative studies subsequently presented. Then, a simple but novel experimental methodology for the comparison of artifact processing techniques is proposed, designed and tested for algorithm evaluation. The method is demonstrated to be highly eective for the type of artifact challenges common in a connected health setting, particularly those concerned with brain activity monitoring. This research primarily focuses on applying the techniques to functional near infrared spectroscopy (fNIRS) and electroencephalography (EEG) data due to their high susceptibility to contamination by subject motion related artifact. Using the novel experimental methodology, complemented with simulated data, a comprehensive comparison of a range of artifact processing methods is conducted, allowing the identication of the set of the best performing methods. A novel artifact removal technique is also developed, namely ensemble empirical mode decomposition with canonical correlation analysis (EEMD-CCA), which provides the best results when applied on fNIRS data under particular conditions. Four of the best performing techniques were then tested on real ambulatory EEG data contaminated with movement artifacts comparable to those observed during in-home monitoring. It was determined that when analysing EEG data, the Wiener lter is consistently the best performing artifact removal technique. However, when employing the fNIRS data, the best technique depends on a number of factors including: 1) the availability of a reference signal and 2) whether or not the form of the artifact is known. It is envisaged that the use of physiological signal monitoring for patient healthcare will grow signicantly over the next number of decades and it is hoped that this thesis will aid in the progression and development of artifact removal techniques capable of supporting this growth

Efficient procedure to remove ECG from sEMG with limited deteriorations: Extraction, quasi-periodic detection and cancellation

An efficient method is presented to remove ECG from EMG with limited deterioration. The ECG pulses are first localized and then remove only where they have been detected. A combination of ICA and DWT is first used to extract ECG information. Then, the pulses positions are detected with an original algorithm based on FFT which takes advantage of the quasi-periodic nature of the ECG. The proposed method accurately detects pulses positions and efficiently removes the ECG from EMG signals even when both signals are strongly overlapped. The interpretations of the surface electromyography (sEMG) signals from the trunk region are strongly distorted by the heart activity (ECG), especially in case of low-amplitude EMG responses analyses. Many methods have been investigated to resolve this nontrivial problem, by using advanced data processing on the overall sEMG recorded signal. However, if they reduce ECG artifacts, those cancellation methods also deteriorate noiseless parts of the signal. This work proposes an original ECG cancellation method designed to limit the deterioration of sEMG information. To do that, the proposed techniques does not directly attempt to remove the ECG, but is based on two main steps: the localization of ECG and the cancellation of ECG but only where heart pulses have been detected. The phase of localization efficiently extracts the ECG contribution by combining the discrete wavelet transforms (DWT) and the method of independent component analysis (ICA). And finally, this phase takes advantage of quasi-periodic properties of ECG signals to accurately detect pulses localization with an original algorithm based on the fast Fourier transform (FFT). Intensive simulations were achieved in terms of relative errors, coherence and accuracy for different levels of ECG interference. And the correlation coefficients computed from the paraspinal muscles EMG signals of 12 healthy participants were also used to evaluate the developed method. The results from simulation and real data demonstrate that the proposed method accurately detects pulses positions and efficiently removes the ECG from EMG signals, even when both signals are strongly overlapped, and greatly limits the deterioration of the EMG

Evaluation of Data Processing and Artifact Removal Approaches Used for Physiological Signals Captured Using Wearable Sensing Devices during Construction Tasks

Wearable sensing devices (WSDs) have enormous promise for monitoring construction worker safety. They can track workers and send safety-related information in real time, allowing for more effective and preventative decision making. WSDs are particularly useful on construction sites since they can track workers’ health, safety, and activity levels, among other metrics that could help optimize their daily tasks. WSDs may also assist workers in recognizing health-related safety risks (such as physical fatigue) and taking appropriate action to mitigate them. The data produced by these WSDs, however, is highly noisy and contaminated with artifacts that could have been introduced by the surroundings, the experimental apparatus, or the subject’s physiological state. These artifacts are very strong and frequently found during field experiments. So, when there is a lot of artifacts, the signal quality drops. Recently, artifacts removal has been greatly enhanced by developments in signal processing, which has vastly enhanced the performance. Thus, the proposed review aimed to provide an in-depth analysis of the approaches currently used to analyze data and remove artifacts from physiological signals obtained via WSDs during construction-related tasks. First, this study provides an overview of the physiological signals that are likely to be recorded from construction workers to monitor their health and safety. Second, this review identifies the most prevalent artifacts that have the most detrimental effect on the utility of the signals. Third, a comprehensive review of existing artifact-removal approaches were presented. Fourth, each identified artifact detection and removal approach was analyzed for its strengths and weaknesses. Finally, in conclusion, this review provides a few suggestions for future research for improving the quality of captured physiological signals for monitoring the health and safety of construction workers using artifact removal approaches

Removal of electrocardiographic corruption from electromyographic signals using a localized wavelet based approach.

Introduction: Approximately 12,000 new cases of spinal cord injury (SCI) are reported each year in the US. Currently, the most widely used method of assessing the recovery of voluntary capability after spinal cord injury is the American Spinal Injury Association Impairment Scale (AIS). However, this test is not objective and is not sensitive enough to detect small activities. Recent studies have been using surface electromyography (EMG) to develop objective and sensitive spinal cord injury (SCI) characterization protocols. EMG recordings from the trunk muscles are contaminated with the electrical activity of the heart (ECG, electrocardiography). Depending on the level, spinal cord injury may disrupt the control of the trunk muscles, and EMG recordings from these muscles will be very weak compared to those in non-injured individuals. The elimination of ECG artifacts play critical role in precise evaluation of the trunk muscles in these individuals. While common global digital filters may generally remove some of the ECG corruption from the signal, these filters also remove or alter valuable EMG signal, which makes the physiological importance of these signals irrelevant. Methods: Local filtering approach was developed to remove this ECG noise, without significantly altering the EMG signal. The local filtering approach uses externally recorded ECG signals, in a separate lead configuration, as a mask to locate the area of ECG spikes within the noisy EMG signal. The areas of the signal containing the ECG noise are decomposed into 128 sub-wavelets using custom-scaled Morlet Wavelet Transform. Sub-wavelets pertaining to ECG within the signal at the ECG spike location are then removed, and the signal is reconstructed to create a clean EMG signal. This process is analytically tested for robustness and accuracy, using customized validation metrics, on simulated phantom signals. It is compared with a global Morlet Wavelet filter that does not localize its filtering process on the ECG spikes. Results: It was found that the localized filtering significantly reduced the Root-Mean-Squared (RMS) of the area of the signal containing ECG spikes. The Localized Filter also significantly reduced the error produced from removal of EMG signal in the areas outside of ECG spikes compared to global filter. The proposed local filter doesn’t degrade the signal, even at low ECG amplitudes (~60% improvement), compared to the global filter, which destroys the signal at this low amplitude ECG (-100% improvement). The proposed local filter is also far more efficient at removing larger amplitude ECG (more critical) than the global filter, which has a narrow range of signals that it can efficiently remove ECG. Hence, the proposed local filter is more robust and clinical-ready than the global filter. Conclusion: Proposed approach is far superior in terms of ECG removal accuracy, and introduction of artifact error from processing, compared to comparable global filter. It provides a mean to improve analysis of EMG signals as a tool to assess recovery from SCI

A Brief Summary of EEG Artifact Handling

There are various obstacles in the way of use of EEG. Among these, the major obstacles are the artifacts. While some artifacts are avoidable, due to the nature of the EEG techniques there are inevitable artifacts as well. Artifacts can be categorized as internal/physiological or external/non-physiological. The most common internal artifacts are ocular or muscular origins. Internal artifacts are difficult to detect and remove, because they contain signal information as well. For both resting state EEG and ERP studies, artifact handling needs to be carefully carried out in order to retain the maximal signal. Therefore, an effective management of these inevitable artifacts is critical for the EEG based researches. Many researchers from various fields studied this challenging phenomenon and came up with some solutions. However, the developed methods are not well known by the real practitioners of EEG as a tool because of their limited knowledge about these engineering approaches. They still use the traditional visual inspection of the EEG. This work aims to inform the researchers working in the field of EEG about the artifacts and artifact management options available in order to increase the awareness of the available tools such as EEG preprocessing pipelines

Analysis and applications of respiratory surface EMG:report of a round table meeting

Surface electromyography (sEMG) can be used to measure the electrical activity of the respiratory muscles. The possible applications of sEMG span from patients suffering from acute respiratory failure to patients receiving chronic home mechanical ventilation, to evaluate muscle function, titrate ventilatory support and guide treatment. However, sEMG is mainly used as a monitoring tool for research and its use in clinical practice is still limited—in part due to a lack of standardization and transparent reporting. During this round table meeting, recommendations on data acquisition, processing, interpretation, and potential clinical applications of respiratory sEMG were discussed. This paper informs the clinical researcher interested in respiratory muscle monitoring about the current state of the art on sEMG, knowledge gaps and potential future applications for patients with respiratory failure.</p