1,010 research outputs found
Soliton Dynamics in Computational Anatomy
Computational anatomy (CA) has introduced the idea of anatomical structures
being transformed by geodesic deformations on groups of diffeomorphisms. Among
these geometric structures, landmarks and image outlines in CA are shown to be
singular solutions of a partial differential equation that is called the
geodesic EPDiff equation. A recently discovered momentum map for singular
solutions of EPDiff yields their canonical Hamiltonian formulation, which in
turn provides a complete parameterization of the landmarks by their canonical
positions and momenta. The momentum map provides an isomorphism between
landmarks (and outlines) for images and singular soliton solutions of the
EPDiff equation. This isomorphism suggests a new dynamical paradigm for CA, as
well as new data representation.Comment: published in NeuroImag
Multiple Shape Registration using Constrained Optimal Control
Lagrangian particle formulations of the large deformation diffeomorphic
metric mapping algorithm (LDDMM) only allow for the study of a single shape. In
this paper, we introduce and discuss both a theoretical and practical setting
for the simultaneous study of multiple shapes that are either stitched to one
another or slide along a submanifold. The method is described within the
optimal control formalism, and optimality conditions are given, together with
the equations that are needed to implement augmented Lagrangian methods.
Experimental results are provided for stitched and sliding surfaces
Averaged Template Matching Equations
By exploiting an analogy with averaging procedures in fluid
dynamics, we present a set of averaged template matching equations.
These equations are analogs of the exact template matching equations
that retain all the geometric properties associated with the diffeomorphismgrou
p, and which are expected to average out small scale features
and so should, as in hydrodynamics, be more computationally efficient
for resolving the larger scale features. Froma geometric point of view,
the new equations may be viewed as coming from a change in norm that
is used to measure the distance between images. The results in this paper
represent first steps in a longer termpro gram: what is here is only
for binary images and an algorithm for numerical computation is not
yet operational. Some suggestions for further steps to develop the results
given in this paper are suggested
Mixture of Kernels and Iterated Semidirect Product of Diffeomorphisms Groups
In the framework of large deformation diffeomorphic metric mapping (LDDMM),
we develop a multi-scale theory for the diffeomorphism group based on previous
works. The purpose of the paper is (1) to develop in details a variational
approach for multi-scale analysis of diffeomorphisms, (2) to generalise to
several scales the semidirect product representation and (3) to illustrate the
resulting diffeomorphic decomposition on synthetic and real images. We also
show that the approaches presented in other papers and the mixture of kernels
are equivalent.Comment: 21 pages, revised version without section on evaluatio
Statistical M-Estimation and Consistency in Large Deformable Models for Image Warping
The problem of defining appropriate distances between shapes or images and modeling the variability of natural images by group transformations is at the heart of modern image analysis. A current trend is the study of probabilistic and statistical aspects of deformation models, and the development of consistent statistical procedure for the estimation of template images. In this paper, we consider a set of images randomly warped from a mean template which has to be recovered. For this, we define an appropriate statistical parametric model to generate random diffeomorphic deformations in two-dimensions. Then, we focus on the problem of estimating the mean pattern when the images are observed with noise. This problem is challenging both from a theoretical and a practical point of view. M-estimation theory enables us to build an estimator defined as a minimizer of a well-tailored empirical criterion. We prove the convergence of this estimator and propose a gradient descent algorithm to compute this M-estimator in practice. Simulations of template extraction and an application to image clustering and classification are also provided
Diffeomorphic density registration
In this book chapter we study the Riemannian Geometry of the density
registration problem: Given two densities (not necessarily probability
densities) defined on a smooth finite dimensional manifold find a
diffeomorphism which transforms one to the other. This problem is motivated by
the medical imaging application of tracking organ motion due to respiration in
Thoracic CT imaging where the fundamental physical property of conservation of
mass naturally leads to modeling CT attenuation as a density. We will study the
intimate link between the Riemannian metrics on the space of diffeomorphisms
and those on the space of densities. We finally develop novel computationally
efficient algorithms and demonstrate there applicability for registering RCCT
thoracic imaging.Comment: 23 pages, 6 Figures, Chapter for a Book on Medical Image Analysi
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