Bioinformatics service reconciliation by heterogeneous schema transformation

This paper focuses on the problem of bioinformatics service reconciliation in a generic and scalable manner so as to enhance interoperability in a highly evolving field. Using XML as a common representation format, but also supporting existing flat-file representation formats, we propose an approach for the scalable semi-automatic reconciliation of services, possibly invoked from within a scientific workflows tool. Service reconciliation may use the AutoMed heterogeneous data integration system as an intermediary service, or may use AutoMed to produce services that mediate between services. We discuss the application of our approach for the reconciliation of services in an example bioinformatics workflow. The main contribution of this research is an architecture for the scalable reconciliation of bioinformatics services

An agile business process and practice meta-model

Business Process Management (BPM) encompasses the discovery, modelling, monitoring, analysis and improvement of business processes. Limitations of traditional BPM approaches in addressing changes in business requirements have resulted in a number of agile BPM approaches that seek to accelerate the redesign of business process models. Meta-models are a key BPM feature that reduce the ambiguity of business process models. This paper describes a meta-model supporting the agile version of the Business Process and Practice Alignment Methodology (BPPAM) for business process improvement, which captures process information from actual work practices. The ability of the meta-model to achieve business process agility is discussed and compared with other agile meta-models, based on definitions of business process flexibility and agility found in the literature. (C) 2017 The Authors. Published by Elsevier B.V

Semantic Query Reformulation in Social PDMS

We consider social peer-to-peer data management systems (PDMS), where each peer maintains both semantic mappings between its schema and some acquaintances, and social links with peer friends. In this context, reformulating a query from a peer's schema into other peer's schemas is a hard problem, as it may generate as many rewritings as the set of mappings from that peer to the outside and transitively on, by eventually traversing the entire network. However, not all the obtained rewritings are relevant to a given query. In this paper, we address this problem by inspecting semantic mappings and social links to find only relevant rewritings. We propose a new notion of 'relevance' of a query with respect to a mapping, and, based on this notion, a new semantic query reformulation approach for social PDMS, which achieves great accuracy and flexibility. To find rapidly the most interesting mappings, we combine several techniques: (i) social links are expressed as FOAF (Friend of a Friend) links to characterize peer's friendship and compact mapping summaries are used to obtain mapping descriptions; (ii) local semantic views are special views that contain information about external mappings; and (iii) gossiping techniques improve the search of relevant mappings. Our experimental evaluation, based on a prototype on top of PeerSim and a simulated network demonstrate that our solution yields greater recall, compared to traditional query translation approaches proposed in the literature.Comment: 29 pages, 8 figures, query rewriting in PDM

Philosophy of Blockchain Technology - Ontologies

About the necessity and usefulness of developing a philosophy specific to the blockchain technology, emphasizing on the ontological aspects. After an Introduction that highlights the main philosophical directions for this emerging technology, in Blockchain Technology I explain the way the blockchain works, discussing ontological development directions of this technology in Designing and Modeling. The next section is dedicated to the main application of blockchain technology, Bitcoin, with the social implications of this cryptocurrency. There follows a section of Philosophy in which I identify the blockchain technology with the concept of heterotopia developed by Michel Foucault and I interpret it in the light of the notational technology developed by Nelson Goodman as a notational system. In the Ontology section, I present two developmental paths that I consider important: Narrative Ontology, based on the idea of order and structure of history transmitted through Paul Ricoeur's narrative history, and the Enterprise Ontology system based on concepts and models of an enterprise, specific to the semantic web, and which I consider to be the most well developed and which will probably become the formal ontological system, at least in terms of the economic and legal aspects of blockchain technology. In Conclusions I am talking about the future directions of developing the blockchain technology philosophy in general as an explanatory and robust theory from a phenomenologically consistent point of view, which allows testability and ontologies in particular, arguing for the need of a global adoption of an ontological system for develop cross-cutting solutions and to make this technology profitable. CONTENTS: Abstract Introducere Tehnologia blockchain - Proiectare - Modele Bitcoin Filosofia Ontologii - Ontologii narative - Ontologii de intreprindere Concluzii Note Bibliografie DOI: 10.13140/RG.2.2.24510.3360

A Robust Logical and Computational Characterisation of Peer-to-Peer Database Systems

In this paper we give a robust logical and computational characterisation of peer-to-peer (p2p) database systems. We first define a precise model-theoretic semantics of a p2p system, which allows for local inconsistency handling. We then characterise the general computational properties for the problem of answering queries to such a p2p system. Finally, we devise tight complexity bounds and distributed procedures for the problem of answering queries in few relevant special cases

Semantic-based policy engineering for autonomic systems

This paper presents some important directions in the use of ontology-based semantics in achieving the vision of Autonomic Communications. We examine the requirements of Autonomic Communication with a focus on the demanding needs of ubiquitous computing environments, with an emphasis on the requirements shared with Autonomic Computing. We observe that ontologies provide a strong mechanism for addressing the heterogeneity in user task requirements, managed resources, services and context. We then present two complimentary approaches that exploit ontology-based knowledge in support of autonomic communications: service-oriented models for policy engineering and dynamic semantic queries using content-based networks. The paper concludes with a discussion of the major research challenges such approaches raise

Integrating sensor streams in pHealth networks

Personal Health (pHealth) sensor networks are generally used to monitor the wellbeing of both athletes and the general public to inform health specialists of future and often serious ailments. The problem facing these domain experts is the scale and quality of data they must search in order to extract meaningful results. By using peer-to-peer sensor architectures and a mechanism for reducing the search space, we can, to some extent, address the scalability issue. However, synchronisation and normalisation of distributed sensor streams remains a problem in many networks. In the case of pHealth sensor networks, it is crucial for experts to align multiple sensor readings before query or data mining activities can take place. This paper presents a system for clustering and synchronising sensor streams in preparation for user queries