Data Driven MCMC for Appearance-based Topological Mapping

Probabilistic techniques have become the mainstay of robotic mapping, particularly for generating metric maps. In previous work, we have presented a hitherto nonexistent general purpose probabilistic framework for dealing with topological mapping. This involves the creation of Probabilistic Topological Maps (PTMs), a sample-based representation that approximates the posterior distribution over topologies given available sensor measurements. The PTM is inferred using Markov Chain Monte Carlo (MCMC) that overcomes the combinatorial nature of the problem. In this paper, we address the problem of integrating appearance measurements into the PTM framework. Specifically, we consider appearance measurements in the form of panoramic images obtained from a camera rig mounted on a robot. We also propose improvements to the efficiency of the MCMC algorithm through the use of an intelligent data-driven proposal distribution. We present experiments t hat illustrate the robustness and wide applicability of our algorithm

Induction of Topological Environment Maps from Sequences of Visited Places

In this paper we address the problem of topologically mapping environments which contain inherent perceptual aliasing caused by repeated environment structures. We propose an approach that does not use motion or odometric information but only a sequence of deterministic measurements observed by traversing an environment. Our algorithm implements a stochastic local search to build a small map which is consistent with local adjacency information extracted from a sequence of observations. Moreover, local adjacency information is incorporated to disambiguate places which are physically different but appear identical to the robots senses. Experiments show that the proposed method is capable of mapping environments with a high degree of perceptual aliasing, and that it infers a small map quickly

Topological Mapping and Navigation in Real-World Environments

We introduce the Hierarchical Hybrid Spatial Semantic Hierarchy (H2SSH), a hybrid topological-metric map representation. The H2SSH provides a more scalable representation of both small and large structures in the world than existing topological map representations, providing natural descriptions of a hallway lined with offices as well as a cluster of buildings on a college campus. By considering the affordances in the environment, we identify a division of space into three distinct classes: path segments afford travel between places at their ends, decision points present a choice amongst incident path segments, and destinations typically exist at the start and end of routes. Constructing an H2SSH map of the environment requires understanding both its local and global structure. We present a place detection and classification algorithm to create a semantic map representation that parses the free space in the local environment into a set of discrete areas representing features like corridors, intersections, and offices. Using these areas, we introduce a new probabilistic topological simultaneous localization and mapping algorithm based on lazy evaluation to estimate a probability distribution over possible topological maps of the global environment. After construction, an H2SSH map provides the necessary representations for navigation through large-scale environments. The local semantic map provides a high-fidelity metric map suitable for motion planning in dynamic environments, while the global topological map is a graph-like map that allows for route planning using simple graph search algorithms. For navigation, we have integrated the H2SSH with Model Predictive Equilibrium Point Control (MPEPC) to provide safe and efficient motion planning for our robotic wheelchair, Vulcan. However, navigation in human environments entails more than safety and efficiency, as human behavior is further influenced by complex cultural and social norms. We show how social norms for moving along corridors and through intersections can be learned by observing how pedestrians around the robot behave. We then integrate these learned norms with MPEPC to create a socially-aware navigation algorithm, SA-MPEPC. Through real-world experiments, we show how SA-MPEPC improves not only Vulcan’s adherence to social norms, but the adherence of pedestrians interacting with Vulcan as well.PHDComputer Science & EngineeringUniversity of Michigan, Horace H. Rackham School of Graduate Studieshttps://deepblue.lib.umich.edu/bitstream/2027.42/144014/1/collinej_1.pd

Inferring clonal evolution of tumors from single nucleotide somatic mutations

High-throughput sequencing allows the detection and quantification of frequencies of somatic single nucleotide variants (SNV) in heterogeneous tumor cell populations. In some cases, the evolutionary history and population frequency of the subclonal lineages of tumor cells present in the sample can be reconstructed from these SNV frequency measurements. However, automated methods to do this reconstruction are not available and the conditions under which reconstruction is possible have not been described. We describe the conditions under which the evolutionary history can be uniquely reconstructed from SNV frequencies from single or multiple samples from the tumor population and we introduce a new statistical model, PhyloSub, that infers the phylogeny and genotype of the major subclonal lineages represented in the population of cancer cells. It uses a Bayesian nonparametric prior over trees that groups SNVs into major subclonal lineages and automatically estimates the number of lineages and their ancestry. We sample from the joint posterior distribution over trees to identify evolutionary histories and cell population frequencies that have the highest probability of generating the observed SNV frequency data. When multiple phylogenies are consistent with a given set of SNV frequencies, PhyloSub represents the uncertainty in the tumor phylogeny using a partial order plot. Experiments on a simulated dataset and two real datasets comprising tumor samples from acute myeloid leukemia and chronic lymphocytic leukemia patients demonstrate that PhyloSub can infer both linear (or chain) and branching lineages and its inferences are in good agreement with ground truth, where it is available

Continuous Modeling of 3D Building Rooftops From Airborne LIDAR and Imagery

In recent years, a number of mega-cities have provided 3D photorealistic virtual models to support the decisions making process for maintaining the cities' infrastructure and environment more effectively. 3D virtual city models are static snap-shots of the environment and represent the status quo at the time of their data acquisition. However, cities are dynamic system that continuously change over time. Accordingly, their virtual representation need to be regularly updated in a timely manner to allow for accurate analysis and simulated results that decisions are based upon. The concept of "continuous city modeling" is to progressively reconstruct city models by accommodating their changes recognized in spatio-temporal domain, while preserving unchanged structures. However, developing a universal intelligent machine enabling continuous modeling still remains a challenging task. Therefore, this thesis proposes a novel research framework for continuously reconstructing 3D building rooftops using multi-sensor data. For achieving this goal, we first proposes a 3D building rooftop modeling method using airborne LiDAR data. The main focus is on the implementation of an implicit regularization method which impose a data-driven building regularity to noisy boundaries of roof planes for reconstructing 3D building rooftop models. The implicit regularization process is implemented in the framework of Minimum Description Length (MDL) combined with Hypothesize and Test (HAT). Secondly, we propose a context-based geometric hashing method to align newly acquired image data with existing building models. The novelty is the use of context features to achieve robust and accurate matching results. Thirdly, the existing building models are refined by newly proposed sequential fusion method. The main advantage of the proposed method is its ability to progressively refine modeling errors frequently observed in LiDAR-driven building models. The refinement process is conducted in the framework of MDL combined with HAT. Markov Chain Monte Carlo (MDMC) coupled with Simulated Annealing (SA) is employed to perform a global optimization. The results demonstrates that the proposed continuous rooftop modeling methods show a promising aspects to support various critical decisions by not only reconstructing 3D rooftop models accurately, but also by updating the models using multi-sensor data

How was your day? Online visual workspace summaries using incremental clustering in topic space

Someday mobile robots will operate continually. Day after day, they will be in receipt of a never ending stream of images. In anticipation of this, this paper is about having a mobile robot generate apt and compact summaries of its life experience. We consider a robot moving around its environment both revisiting and exploring, accruing images as it goes. We describe how we can choose a subset of images to summarise the robot's cumulative visual experience. Moreover we show how to do this such that the time cost of generating an summary is largely independent of the total number of images processed. No one day is harder to summarise than any other.Micro Autonomous Consortium Systems and Technology (United States. Army Research Laboratory (Grant W911NF-08-2-0004))United States. Office of Naval Research. Multidisciplinary University Research Initiative (Grant N00014-09-1-1051)United States. Office of Naval Research. Multidisciplinary University Research Initiative (Grant N00014-09-1-1031