1st INCF Workshop on Sustainability of Neuroscience Databases

The goal of the workshop was to discuss issues related to the sustainability of neuroscience databases, identify problems and propose solutions, and formulate recommendations to the INCF. The report summarizes the discussions of invited participants from the neuroinformatics community as well as from other disciplines where sustainability issues have already been approached. The recommendations for the INCF involve rating, ranking, and supporting database sustainability

24th International Conference on Information Modelling and Knowledge Bases

In the last three decades information modelling and knowledge bases have become essentially important subjects not only in academic communities related to information systems and computer science but also in the business area where information technology is applied. The series of European – Japanese Conference on Information Modelling and Knowledge Bases (EJC) originally started as a co-operation initiative between Japan and Finland in 1982. The practical operations were then organised by professor Ohsuga in Japan and professors Hannu Kangassalo and Hannu Jaakkola in Finland (Nordic countries). Geographical scope has expanded to cover Europe and also other countries. Workshop characteristic - discussion, enough time for presentations and limited number of participants (50) / papers (30) - is typical for the conference. Suggested topics include, but are not limited to: 1. Conceptual modelling: Modelling and specification languages; Domain-specific conceptual modelling; Concepts, concept theories and ontologies; Conceptual modelling of large and heterogeneous systems; Conceptual modelling of spatial, temporal and biological data; Methods for developing, validating and communicating conceptual models. 2. Knowledge and information modelling and discovery: Knowledge discovery, knowledge representation and knowledge management; Advanced data mining and analysis methods; Conceptions of knowledge and information; Modelling information requirements; Intelligent information systems; Information recognition and information modelling. 3. Linguistic modelling: Models of HCI; Information delivery to users; Intelligent informal querying; Linguistic foundation of information and knowledge; Fuzzy linguistic models; Philosophical and linguistic foundations of conceptual models. 4. Cross-cultural communication and social computing: Cross-cultural support systems; Integration, evolution and migration of systems; Collaborative societies; Multicultural web-based software systems; Intercultural collaboration and support systems; Social computing, behavioral modeling and prediction. 5. Environmental modelling and engineering: Environmental information systems (architecture); Spatial, temporal and observational information systems; Large-scale environmental systems; Collaborative knowledge base systems; Agent concepts and conceptualisation; Hazard prediction, prevention and steering systems. 6. Multimedia data modelling and systems: Modelling multimedia information and knowledge; Contentbased multimedia data management; Content-based multimedia retrieval; Privacy and context enhancing technologies; Semantics and pragmatics of multimedia data; Metadata for multimedia information systems. Overall we received 56 submissions. After careful evaluation, 16 papers have been selected as long paper, 17 papers as short papers, 5 papers as position papers, and 3 papers for presentation of perspective challenges. We thank all colleagues for their support of this issue of the EJC conference, especially the program committee, the organising committee, and the programme coordination team. The long and the short papers presented in the conference are revised after the conference and published in the Series of “Frontiers in Artificial Intelligence” by IOS Press (Amsterdam). The books “Information Modelling and Knowledge Bases” are edited by the Editing Committee of the conference. We believe that the conference will be productive and fruitful in the advance of research and application of information modelling and knowledge bases. Bernhard Thalheim Hannu Jaakkola Yasushi Kiyok

Evolutionary Decomposition of Complex Design Spaces

This dissertation investigates the support of conceptual engineering design through the decomposition of multi-dimensional search spaces into regions of high performance. Such decomposition helps the designer identify optimal design directions by the elimination of infeasible or undesirable regions within the search space. Moreover, high levels of interaction between the designer and the model increases overall domain knowledge and significantly reduces uncertainty relating to the design task at hand. The aim of the research is to develop the archetypal Cluster Oriented Genetic Algorithm (COGA) which achieves search space decomposition by using variable mutation (vmCOGA) to promote diverse search and an Adaptive Filter (AF) to extract solutions of high performance [Parmee 1996a, 1996b]. Since COGAs are primarily used to decompose design domains of unknown nature within a real-time environment, the elimination of apriori knowledge, speed and robustness are paramount. Furthermore COGA should promote the in-depth exploration of the entire search space, sampling all optima and the surrounding areas. Finally any proposed system should allow for trouble free integration within a Graphical User Interface environment. The replacement of the variable mutation strategy with a number of algorithms which increase search space sampling are investigated. Utility is then increased by incorporating a control mechanism that maintains optimal performance by adapting each algorithm throughout search by means of a feedback measure based upon population convergence. Robustness is greatly improved by modifying the Adaptive Filter through the introduction of a process that ensures more accurate modelling of the evolving population. The performance of each prospective algorithm is assessed upon a suite of two-dimensional test functions using a set of novel performance metrics. A six dimensional test function is also developed where the areas of high performance are explicitly known, thus allowing for evaluation under conditions of increased dimensionality. Further complexity is introduced by two real world models described by both continuous and discrete parameters. These relate to the design of conceptual airframes and cooling hole geometries within a gas turbine. Results are promising and indicate significant improvement over the vmCOGA in terms of all desired criteria. This further supports the utilisation of COGA as a decision support tool during the conceptual phase of design.British Aerospace plc, Warton and Rolls Royce plc, Filto

Supporting Governance in Healthcare Through Process Mining: A Case Study

Healthcare organizations are under increasing pressure to improve productivity, gain competitive advantage and reduce costs. In many cases, despite management already gained some kind of qualitative intuition about inefciencies and possible bottlenecks related to the enactment of patients' careows, it does not have the right tools to extract knowledge from available data and make decisions based on a quantitative analysis. To tackle this issue, starting from a real case study conducted in San Carlo di Nancy hospital in Rome (Italy), this article presents the results of a process mining project in the healthcare domain. Process mining techniques are here used to infer meaningful knowledge about the patient careflows from raw event logs consisting of clinical data stored by the hospital information systems. These event logs are analyzed using the ProM framework from three different perspectives: the control flow perspective, the organizational perspective and the performance perspective. The results on the proposed case study show that process mining provided useful insights for the governance of the hospital. In particular, we were able to provide answers to the management of the hospital concerning the value of last investments, and the temporal distribution of abandonments from emergency room and exams without reservation

Enabling European Archaeological Research: The ARIADNE E-Infrastructure

In the last 20 years, e-infrastructures have become ever more important for the conduct and progress of research in all branches of scientific enterprise. Increasingly collaborative, distributed and data-intensive research requires the sharing of resources (data, tools, computing facilities) via e-infrastructure as well as support for effective co-operation among research groups (ESF 2011; ESFRI 2016). Moreover there is the expectation that with large datasets ('big data'), e-infrastructure and advanced computing techniques, new scientific questions can be tackled. The archaeological research community has been an early adopter of various digital methods and tools for data acquisition, organisation, analysis and presentation of research results of individual projects. The provision of e-infrastructure and services for data sharing, discovery, access and re-use for the heritage sector is, however, lagging behind other research fields, such as the natural and life sciences. The consequence is a high level of fragmentation of archaeological data and limited capability for collaborative research across institutional and national as well as disciplinary boundaries (Aspöck and Geser 2014). This situation is being addressed by ARIADNE: the Advanced Research Infrastructure for Archaeological Dataset Networking in Europe. This e-infrastructure initiative is being promoted by a consortium of archaeological institutes, data archives and technology developers, and funded under the European Commission's Seventh Framework Programme (ARIADNE 2014a; Niccolucci and Richards 2013). ARIADNE enables archaeological data providers, large and small, to register and connect their resources (datasets, collections) to the e-infrastructure, and a data portal provides search, access and other services across the integrated resources. The portal puts into operation a proof of concept exemplar first developed under the ARENA (Archaeological Records of Europe Networked Access) project (Kenny and Richards 2005; Kilbride 2004), itself inspired by a proposal made by Hansen (1993). ARIADNE integrates resource discovery metadata using various controlled vocabularies, e.g. the W3C Data Catalogue Vocabulary (adapted for describing archaeological datasets), subject thesauri, gazetteers, chronologies, and the CIDOC Conceptual Reference Model (CRM). Based on this integration the data portal offers several ways to search and access resources made available by data providers located in different countries. ARIADNE thus acts as a broker between data providers and users and offers additional web services for products such as high-resolution images, Reflectance Transformation Imaging (RTI), 3D objects and landscapes. Employing such services in research projects or for content deposited in digital archives will greatly enhance the ability of researchers to publish, access and study archaeological content online. ARIADNE therefore represents a substantial advance for archaeology; in particular it provides a common platform where dispersed data resources can be uniformly described, discovered and accessed. It is also an essential step towards the even more ambitious goal of offering archaeologists integrated data, tools and computing resources for web-based research that creates new knowledge (e-archaeology). The next section describes the current landscape of data repositories and services for archaeologists in Europe, and the issues that make interoperability between them difficult to realise. The results of the ARIADNE user surveys undertaken to match expectations and requirements for the e-infrastructure and data portal services are then presented. The main part of the article describes ARIADNE's overall architecture, core services (data registration, discovery and access) and other extant or experimental services. A further section presents the on-going evaluation of the data integration and set of services. Finally, the article summarises some lessons already learned in the integration of data resources and services, and considers the prospects for the wider engagement of the archaeological research community in sharing data through the ARIADNE e-infrastructure and portal

Enabling European archaeological research: The ARIADNE E-infrastructure

Research e-infrastructures, digital archives and data services have become important pillars of scientific enterprise that in recent decades has become ever more collaborative, distributed and data-intensive. The archaeological research community has been an early adopter of digital tools for data acquisition, organisation, analysis and presentation of research results of individual projects. However, the provision of einfrastructure and services for data sharing, discovery, access and re-use has lagged behind. This situation is being addressed by ARIADNE: the Advanced Research Infrastructure for Archaeological Dataset Networking in Europe. This EUfunded network has developed an einfrastructure that enables data providers to register and provide access to their resources (datasets, collections) through the ARIADNE data portal, facilitating discovery, access and other services across the integrated resources. This article describes the current landscape of data repositories and services for archaeologists in Europe, and the issues that make interoperability between them difficult to realise. The results of the ARIADNE surveys on users' expectations and requirements are also presented. The main section of the article describes the architecture of the einfrastructure, core services (data registration, discovery and access) and various other extant or experimental services. The ongoing evaluation of the data integration and services is also discussed. Finally, the article summarises lessons learned, and outlines the prospects for the wider engagement of the archaeological research community in sharing data through ARIADNE

Unsupervised Classification of Neolithic Pottery From the Northern Alpine Space Using t-SNE and HDBSCAN

Terms of “Neolithic cultures” are still used to describe spatial and temporal differences in pottery styles across central Europe. These terms date back to research periods when absolute dating methods were lacking and typological classification was used to establish chronologies. Those terms are charged with problematic, biasing notions of social configurations: cultural homogeneity, spatial boundedness, and immobility. In this article, we present an alternative approach to pottery classification by using ceramics from dendrochronologically and C14-dated sites of the 40th–38th c. BC located in the northern Alpine Foreland. The newly developed methodology uses a computational unsupervised classification based on profile shape and additional nominal characteristics using t-Distributed Stochastic Neighbour Embedding and Hierarchical Density-Based Spatial Clustering of Applications with Noise for cluster analyses. Its role in our project was to provide a quantitative, algorithm-based approach to classify large datasets of pottery while simultaneously account for a large number of variables. This enabled us to find similarity structures that would escape human cognitive capacities on which typological classification is based on. It formed one pilar of a mixed method research approach combining qualitative and quantitative methods of pottery classification. Our results show that the premises of cultural homogeneity are untenable but can be methodologically overcome by using the proposed classification approaches

Computer Vision and Architectural History at Eye Level:Mixed Methods for Linking Research in the Humanities and in Information Technology

Information on the history of architecture is embedded in our daily surroundings, in vernacular and heritage buildings and in physical objects, photographs and plans. Historians study these tangible and intangible artefacts and the communities that built and used them. Thus valuableinsights are gained into the past and the present as they also provide a foundation for designing the future. Given that our understanding of the past is limited by the inadequate availability of data, the article demonstrates that advanced computer tools can help gain more and well-linked data from the past. Computer vision can make a decisive contribution to the identification of image content in historical photographs. This application is particularly interesting for architectural history, where visual sources play an essential role in understanding the built environment of the past, yet lack of reliable metadata often hinders the use of materials. The automated recognition contributes to making a variety of image sources usable forresearch.<br/