Crop Mapping Using PROBA-V Time Series Data at the Yucheng and Hongxing Farm in China

PROBA-V is a new global vegetation monitoring satellite launched in the second quarter of 2013 that provides data with a 100 m to 1 km spatial resolution and a daily to 10-day temporal resolution in the visible and near infrared (VNIR) bands. A major mission of the PROBA-V satellite is global agriculture monitoring, in which the accuracy of crop mapping plays a key role. In countries such as China, crop fields are typically small, in assorted shapes and with various management approaches, which deem traditional methods of crop identification ineffective, and accuracy is highly dependent on image resolution and acquisition time. The five-day temporal and 100 m spatial resolution PROBA-V data make it possible to automatically identify crops using time series phenological information. This paper takes advantage of the improved spatial and temporal resolution of the PROBA-V data, to map crops at the Yucheng site in Shandong Province and the Hongxing farm in Heilongjiang province of China. First, the Swets filter algorithm was employed to eliminate noisy pixels and fill in data gaps on time series data during the growing season. Then, the crops are classified based on the Iterative Self-Organizing Data Analysis Technique (ISODATA) clustering, the maximum likelihood method (MLC) and similarity analysis. The mapping results were validated using field-collected crop type polygons and high resolution crop maps based on GaoFen-1 satellite (GF-1) data in 16 m resolution. Our study showed that, for the Yucheng site, the cropping system is simple, mainly dominated by winter wheat–maize rotation. The overall accuracy of crop identification was 73.39% which was slightly better than the result derived from MODIS data. For the Hongxing farm, the cropping system is more complex (i.e., more than three types of crops were planted). The overall accuracy of the crop mapping by PROBA-V was 73.29% which was significantly higher than the MODIS product (46.81%). This study demonstrates that time series PROBA-V data can serve as a useful source for reliable crop identification and area estimation. The high revisiting frequency and global coverage of the PROBA-V data show good potential for future global crop mapping and agricultural monitoring

Crop Mapping Using PROBA-V Time Series Data at the Yucheng and Hongxing Farm in China

PROBA-V is a new global vegetation monitoring satellite launched in the second quarter of 2013 that provides data with a 100 m to 1 km spatial resolution and a daily to 10-day temporal resolution in the visible and near infrared (VNIR) bands. A major mission of the PROBA-V satellite is global agriculture monitoring, in which the accuracy of crop mapping plays a key role. In countries such as China, crop fields are typically small, in assorted shapes and with various management approaches, which deem traditional methods of crop identification ineffective, and accuracy is highly dependent on image resolution and acquisition time. The five-day temporal and 100 m spatial resolution PROBA-V data make it possible to automatically identify crops using time series phenological information. This paper takes advantage of the improved spatial and temporal resolution of the PROBA-V data, to map crops at the Yucheng site in Shandong Province and the Hongxing farm in Heilongjiang province of China. First, the Swets filter algorithm was employed to eliminate noisy pixels and fill in data gaps on time series data during the growing season. Then, the crops are classified based on the Iterative Self-Organizing Data Analysis Technique (ISODATA) clustering, the maximum likelihood method (MLC) and similarity analysis. The mapping results were validated using field-collected crop type polygons and high resolution crop maps based on GaoFen-1 satellite (GF-1) data in 16 m resolution. Our study showed that, for the Yucheng site, the cropping system is simple, mainly dominated by winter wheat–maize rotation. The overall accuracy of crop identification was 73.39% which was slightly better than the result derived from MODIS data. For the Hongxing farm, the cropping system is more complex (i.e., more than three types of crops were planted). The overall accuracy of the crop mapping by PROBA-V was 73.29% which was significantly higher than the MODIS product (46.81%). This study demonstrates that time series PROBA-V data can serve as a useful source for reliable crop identification and area estimation. The high revisiting frequency and global coverage of the PROBA-V data show good potential for future global crop mapping and agricultural monitoring

Mapping of multitemporal rice (Oryza sativa L.) growth stages using remote sensing with multi-sensor and machine learning : a thesis dissertation presented in partial fulfilment of the requirements for the degree of Doctor of Philosophy in Earth Science at Massey University, Manawatū, New Zealand

Figure 2.1 is adapted and re-used under a Creative Commons Attribution 4.0 International (CC BY 4.0) license.Rice (Oryza Sativa) plays a pivotal role in food security for Asian countries, especially in Indonesia. Due to the increasing pressure of environmental changes, such as land use and climate, rice cultivation areas need to be monitored regularly and spatially to ensure sustainable rice production. Moreover, timely information of rice growth stages (RGS) can lead to more efficient of inputs distribution from water, seed, fertilizer, and pesticide. One of the efficient solutions for regularly mapping the rice crop is using Earth observation satellites. Moreover, the increasing availability of open access satellite images such as Landsat-8, Sentinel-1, and Sentinel-2 provides ample opportunities to map continuous and high-resolution rice growth stages with greater accuracy. The majority of the literature has focused on mapping rice area, cropping patterns and relied mainly on the phenology of vegetation. However, the mapping process of RGS was difficult to assess the accuracy, time-consuming, and depended on only one sensor. In this work, we discuss the use of machine learning algorithms (MLA) for mapping paddy RGS with multiple remote sensing data in near-real-time. The study area was Java Island, which is the primary rice producer in Indonesia. This study has investigated: (1) the mapping of RGS using Landsat-8 imagery and different MLAs, and their rigorous performance was evaluated by conducting a multitemporal analysis; (2) the temporal consistency of predicting RGS using Sentinel-2, MOD13Q1, and Sentinel-1 data; (3) evaluating the correlation of local statistics data and paddy RGS using Sentinel-2, PROBA-V, and Sentinel-1 with MLAs. The ground truth datasets were collected from multi-year web camera data (2014-2016) and three months of the field campaign in different regions of Java (2018). The study considered the RGS in the analysis to be vegetative, reproductive, ripening, bare land, and flooding, and MLAs such as support vector machines (SVMs), random forest (RF), and artificial neural network (ANN) were used. The temporal consistency matrix was used to compare the classification maps within three sensor datasets (Landsat-8 OLI, Sentinel-2, and Sentinel-2, MOD13Q1, Sentinel-1) and in four periods (5, 10, 15, 16 days). Moreover, the result of the RGS map was also compared with monthly data from local statistics within each sub-district using cross-correlation analysis. The result from the analysis shows that SVM with a radial base function outperformed the RF and ANN and proved to be a robust method for small-size datasets (< 1,000 points). Compared to Sentinel-2, Landsat-8 OLI gives less accuracy due to the lack of a red-edge band and larger pixel size (30 x 30 m). Integration of Sentinel-2, MOD13Q1, and Sentinel-1 improved the classification performance and increased the temporal availability of cloud-free maps. The integration of PROBA-V and Sentinel-1 improved the classification accuracy from the Landsat-8 result, consistent with the monthly rice planting area statistics at the sub-district level. The western area of Java has the highest accuracy and consistency since the cropping pattern only relied on rice cultivation. In contrast, less accuracy was noticed in the eastern area because of upland rice cultivation due to limited irrigation facilities and mixed cropping. In addition, the cultivation of shallots to the north of Nganjuk Regency interferes with the model predictions because the cultivation of shallots resembles the vegetative phase due to the water banks. One future research idea is the auto-detection of the cropping index in the complex landscape to be able to use it for mapping RGS on a global scale. Detection of the rice area and RGS using Google Earth Engine (GEE) can be an action plan to disseminate the information quickly on a planetary scale. Our results show that the multitemporal Sentinel-1 combined with RF can detect rice areas with high accuracy (>91%). Similarly, accurate RGS maps can be detected by integrating multiple remote sensing (Sentinel-2, Landsat-8 OLI, and MOD13Q1) data with acceptable accuracy (76.4%), with high temporal frequency and lower cloud interference (every 16 days). Overall, this study shows that remote sensing combined with the machine learning methodology can deliver information on RGS in a timely fashion, which is easy to scale up and consistent both in time and space and matches the local statistics. This thesis is also in line with the existing rice monitoring projects such as Crop Monitor, Crop Watch, AMIS, and Sen4Agri to support disseminating information over a large area. To sum up, the proposed workflow and detailed map provide a more accurate method and information in near real-time for stakeholders, such as governmental agencies against the existing mapping method. This method can be introduced to provide accurate information to rice farmers promptly with sufficient inputs such as irrigation, seeds, and fertilisers for ensuring national food security from the shifting planting time due to climate change

Remote sensing of peanut cropping areas and modelling of their future geographic distribution and disease risks

Peanut or groundnut (Arachis hypogaea L), one of the most important oil seed crops, faces several challenges due to climate change. The unfavourable climate in Australia, as a result of high climate variability, could easily affect peanut production. For example, the incidence of drought stress will increase the likelihood of one of the major problems in the peanut industry, i.e. aflatoxin. In addition, if the climate changes as projected, shifts in geographic distribution of peanut crops and the associated diseases are inevitable. In view of these concerns, this study set the following objectives: 1) to assess the effectiveness of PROBA-V imagery in mapping peanut crops; 2) to study the effects of climate change on the future geographic distribution of peanut crops in Australia; and 3) to examine the effects of climate change on the future distribution of aflatoxin in peanut crops, and to locate high risk areas of aflatoxin in the future areas of peanut crop production. In this study, the area of peanut crop mapping was the South Burnett region in Queensland, while the area of future geographic distribution of peanut crops and aflatoxin covered the entire continent of Australia. To address the first objective, the peanut crop areas were mapped using time-series PROBA-V NDVI by stacking time-series imagery and generating the phenological parameter imagery. Three classification algorithms were used: maximum likelihood classification (MLC), spectral angle mapper (SAM), and minimum distance classification (Min). The results reveal that the overall accuracy of mapping using time-series imagery outweighed phenological parameter imagery, although both datasets performed very well in mapping peanut crops. MLC application in the time-series imagery dataset produced the best result, i.e. overall accuracy of 92.75%, with producer and user accuracy of each class ≥ 78.79%. Specifically for peanut crops, all the algorithms tested produced satisfactory results (≥75.95% of producer and user accuracy), except for the producer accuracy of Min algorithm. Overall, PROBA-V imagery can provide satisfactory results in mapping peanut crops in the study area. For the second objective, the effects of climate change in the potential future geographic distribution of peanut crops in Australia for 2030, 2050, 2070, and 2100 were studied using the CLIMEX program (a Species Distribution Model) under Global Climate Models (GCMs) of CSIRO-Mk3.0 and MIROC-H. The results show an increase in unsuitable areas for peanut cultivation in Australia throughout the projection years for the two GCMs. However, the CSIRO-Mk3 projection of unsuitable areas for 2100 was higher (76% of Australian land) than MIROC-H projection (48% of Australian land). Both GCMs agreed that some current peanut cultivation areas will become unsuitable in the future, while only limited areas will still remain suitable for peanut cultivation. The present study confirms the effects of climate change on the suitability of peanut growing areas in the future. In the third objective, the impacts of climate change on future aflatoxin distribution in Australia and the high risk areas of aflatoxin incidence in the projected future distribution of peanut crops were examined. The projected future distribution of aflatoxin for 2030, 2050, 2070, and 2100 was also modelled using CLIMEX under CSIRO-Mk3.0 and MIROC-H GCMs. The results demonstrated that only a small portion of the Australian continent will be optimal/suitable for aflatoxin persistence, due to the incidence of heat and dry stresses. The map overlay results between the future projections of aflatoxin and peanut crops resulted in small areas of low aflatoxin risk in the future projected areas of peanut crops. It is projected that most of the current peanut cultivation areas will have a high aflatoxin risk, while others will no longer be favourable for peanut cultivation in the future. This study has clearly demonstrated the ability of PROBA-V satellite imagery in mapping peanut crops. It has also demonstrated that climate change incidence will affect the suitability areas of future geographical distribution of peanut crops and the associated aflatoxin disease. This study provides strategic information on current peanut growing areas, future suitable areas for peanut crops in Australia, and future high risk areas of aflatoxin incidence. This information will provide valuable contributions to the long-term planning of peanut cultivation in the country