Hydrodynamics of Suspensions of Passive and Active Rigid Particles: A Rigid Multiblob Approach

We develop a rigid multiblob method for numerically solving the mobility problem for suspensions of passive and active rigid particles of complex shape in Stokes flow in unconfined, partially confined, and fully confined geometries. As in a number of existing methods, we discretize rigid bodies using a collection of minimally-resolved spherical blobs constrained to move as a rigid body, to arrive at a potentially large linear system of equations for the unknown Lagrange multipliers and rigid-body motions. Here we develop a block-diagonal preconditioner for this linear system and show that a standard Krylov solver converges in a modest number of iterations that is essentially independent of the number of particles. For unbounded suspensions and suspensions sedimented against a single no-slip boundary, we rely on existing analytical expressions for the Rotne-Prager tensor combined with a fast multipole method or a direct summation on a Graphical Processing Unit to obtain an simple yet efficient and scalable implementation. For fully confined domains, such as periodic suspensions or suspensions confined in slit and square channels, we extend a recently-developed rigid-body immersed boundary method to suspensions of freely-moving passive or active rigid particles at zero Reynolds number. We demonstrate that the iterative solver for the coupled fluid and rigid body equations converges in a bounded number of iterations regardless of the system size. We optimize a number of parameters in the iterative solvers and apply our method to a variety of benchmark problems to carefully assess the accuracy of the rigid multiblob approach as a function of the resolution. We also model the dynamics of colloidal particles studied in recent experiments, such as passive boomerangs in a slit channel, as well as a pair of non-Brownian active nanorods sedimented against a wall.Comment: Under revision in CAMCOS, Nov 201

A Lifting Relation from Macroscopic Variables to Mesoscopic Variables in Lattice Boltzmann Method: Derivation, Numerical Assessments and Coupling Computations Validation

In this paper, analytic relations between the macroscopic variables and the mesoscopic variables are derived for lattice Boltzmann methods (LBM). The analytic relations are achieved by two different methods for the exchange from velocity fields of finite-type methods to the single particle distribution functions of LBM. The numerical errors of reconstructing the single particle distribution functions and the non-equilibrium distribution function by macroscopic fields are investigated. Results show that their accuracy is better than the existing ones. The proposed reconstruction operator has been used to implement the coupling computations of LBM and macro-numerical methods of FVM. The lid-driven cavity flow is chosen to carry out the coupling computations based on the numerical strategies of domain decomposition methods (DDM). The numerical results show that the proposed lifting relations are accurate and robust

Finite Volume vs.vs. Streaming-based Lattice Boltzmann algorithm for fluid-dynamics simulations: a one-to-one accuracy and performance study

A new finite volume (FV) discretisation method for the Lattice Boltzmann (LB) equation which combines high accuracy with limited computational cost is presented. In order to assess the performance of the FV method we carry out a systematic comparison, focused on accuracy and computational performances, with the standard $streaming$ (ST) Lattice Boltzmann equation algorithm. To our knowledge such a systematic comparison has never been previously reported. In particular we aim at clarifying whether and in which conditions the proposed algorithm, and more generally any FV algorithm, can be taken as the method of choice in fluid-dynamics LB simulations. For this reason the comparative analysis is further extended to the case of realistic flows, in particular thermally driven flows in turbulent conditions. We report the first successful simulation of high-Rayleigh number convective flow performed by a Lattice Boltzmann FV based algorithm with wall grid refinement.Comment: 15 pages, 14 figures (discussion changes, improved figure readability

Hyperbolic Conservation Laws

[no abstract available

A fluctuating boundary integral method for Brownian suspensions

We present a fluctuating boundary integral method (FBIM) for overdamped Brownian Dynamics (BD) of two-dimensional periodic suspensions of rigid particles of complex shape immersed in a Stokes fluid. We develop a novel approach for generating Brownian displacements that arise in response to the thermal fluctuations in the fluid. Our approach relies on a first-kind boundary integral formulation of a mobility problem in which a random surface velocity is prescribed on the particle surface, with zero mean and covariance proportional to the Green's function for Stokes flow (Stokeslet). This approach yields an algorithm that scales linearly in the number of particles for both deterministic and stochastic dynamics, handles particles of complex shape, achieves high order of accuracy, and can be generalized to three dimensions and other boundary conditions. We show that Brownian displacements generated by our method obey the discrete fluctuation-dissipation balance relation (DFDB). Based on a recently-developed Positively Split Ewald method [A. M. Fiore, F. Balboa Usabiaga, A. Donev and J. W. Swan, J. Chem. Phys., 146, 124116, 2017], near-field contributions to the Brownian displacements are efficiently approximated by iterative methods in real space, while far-field contributions are rapidly generated by fast Fourier-space methods based on fluctuating hydrodynamics. FBIM provides the key ingredient for time integration of the overdamped Langevin equations for Brownian suspensions of rigid particles. We demonstrate that FBIM obeys DFDB by performing equilibrium BD simulations of suspensions of starfish-shaped bodies using a random finite difference temporal integrator.Comment: Submitted to J. Comp. Phy

Applications of Asymptotic Analysis

This workshop focused on asymptotic analysis and its fundamental role in the derivation and understanding of the nonlinear structure of mathematical models in various fields of applications, its impact on the development of new numerical methods and on other fields of applied mathematics such as shape optimization. This was complemented by a review as well as the presentation of some of the latest developments of singular perturbation methods