NaNet: a Low-Latency, Real-Time, Multi-Standard Network Interface Card with GPUDirect Features

While the GPGPU paradigm is widely recognized as an effective approach to high performance computing, its adoption in low-latency, real-time systems is still in its early stages. Although GPUs typically show deterministic behaviour in terms of latency in executing computational kernels as soon as data is available in their internal memories, assessment of real-time features of a standard GPGPU system needs careful characterization of all subsystems along data stream path. The networking subsystem results in being the most critical one in terms of absolute value and fluctuations of its response latency. Our envisioned solution to this issue is NaNet, a FPGA-based PCIe Network Interface Card (NIC) design featuring a configurable and extensible set of network channels with direct access through GPUDirect to NVIDIA Fermi/Kepler GPU memories. NaNet design currently supports both standard - GbE (1000BASE-T) and 10GbE (10Base-R) - and custom - 34~Gbps APElink and 2.5~Gbps deterministic latency KM3link - channels, but its modularity allows for a straightforward inclusion of other link technologies. To avoid host OS intervention on data stream and remove a possible source of jitter, the design includes a network/transport layer offload module with cycle-accurate, upper-bound latency, supporting UDP, KM3link Time Division Multiplexing and APElink protocols. After NaNet architecture description and its latency/bandwidth characterization for all supported links, two real world use cases will be presented: the GPU-based low level trigger for the RICH detector in the NA62 experiment at CERN and the on-/off-shore data link for KM3 underwater neutrino telescope

Machine-learning-aided cognitive reconfiguration for flexible-bandwidth HPC and data center networks [Invited]

This paper proposes a machine-learning (ML)-aided cognitive approach for effective bandwidth reconfiguration in optically interconnected datacenter/high-performance computing (HPC) systems. The proposed approach relies on a Hyper-X-like architecture augmented with flexible-bandwidth photonic interconnections at large scales using a hierarchical intra/inter-POD photonic switching layout. We first formulate the problem of the connectivity graph and routing scheme optimization as a mixed-integer linear programming model. A two-phase heuristic algorithm and a joint optimization approach are devised to solve the problem with low time complexity. Then, we propose an ML-based end-to-end performance estimator design to assist the network control plane with intelligent decision making for bandwidth reconfiguration. Numerical simulations using traffic distribution profiles extracted from HPC applications traces as well as random traffic matrices verify the accuracy performance of the ML design estimator (<9% error) and demonstrate up to 5 x throughput gain from the proposed approach compared with the baseline Hyper-X network using fixed all-to-all intra/inter-portable data center interconnects. (C) 2021 Optical Society of Americ

OFAR-CM: Efficient Dragonfly networks with simple congestion management

Dragonfly networks are appealing topologies for large-scale Data center and HPC networks, that provide high throughput with low diameter and moderate cost. However, they are prone to congestion under certain frequent traffic patterns that saturate specific network links. Adaptive non-minimal routing can be used to avoid such congestion. That kind of routing employs longer paths to circumvent local or global congested links. However, if a distance-based deadlock avoidance mechanism is employed, more Virtual Channels (VCs) are required, what increases design complexity and cost. OFAR (On-the-Fly Adaptive Routing) is a previously proposed routing that decouples VCs from deadlock avoidance, making local and global misrouting affordable. However, the severity of congestion with OFAR is higher, as it relies on an escape sub network with low bisection bandwidth. Additionally, OFAR allows for unlimited misroutings on the escape sub network, leading to unbounded paths in the network and long latencies. In this paper we propose and evaluate OFAR-CM, a variant of OFAR combined with a simple congestion management (CM) mechanism which only relies on local information, specifically the credit count of the output ports in the local router. With simple escape sub networks such as a Hamiltonian ring or a tree, OFAR outperforms former proposals with distance-based deadlock avoidance. Additionally, although long paths are allowed in theory, in practice packets arrive at their destination in a small number of hops. Altogether, OFAR-CM constitutes the first practicable mechanism to the date that supports both local and global misrouting in Dragonfly networks.The research leading to these results has received funding from the European Research Council under the European Union’s Seventh Framework Programme (FP/2007-2013) / ERC Grant Agreement n. ERC-2012-Adg-321253- RoMoL, the Spanish Ministry of Science under contracts TIN2010-21291-C02-02, TIN2012-34557, and by the European HiPEAC Network of Excellence. M. García participated in this work while affiliated with the University of Cantabria.Peer ReviewedPostprint (author's final draft

dReDBox: Materializing a full-stack rack-scale system prototype of a next-generation disaggregated datacenter

Current datacenters are based on server machines, whose mainboard and hardware components form the baseline, monolithic building block that the rest of the system software, middleware and application stack are built upon. This leads to the following limitations: (a) resource proportionality of a multi-tray system is bounded by the basic building block (mainboard), (b) resource allocation to processes or virtual machines (VMs) is bounded by the available resources within the boundary of the mainboard, leading to spare resource fragmentation and inefficiencies, and (c) upgrades must be applied to each and every server even when only a specific component needs to be upgraded. The dRedBox project (Disaggregated Recursive Datacentre-in-a-Box) addresses the above limitations, and proposes the next generation, low-power, across form-factor datacenters, departing from the paradigm of the mainboard-as-a-unit and enabling the creation of function-block-as-a-unit. Hardware-level disaggregation and software-defined wiring of resources is supported by a full-fledged Type-1 hypervisor that can execute commodity virtual machines, which communicate over a low-latency and high-throughput software-defined optical network. To evaluate its novel approach, dRedBox will demonstrate application execution in the domains of network functions virtualization, infrastructure analytics, and real-time video surveillance.This work has been supported in part by EU H2020 ICTproject dRedBox, contract #687632.Peer ReviewedPostprint (author's final draft

Non-minimal adaptive routing for efficient interconnection networks

RESUMEN: La red de interconexión es un concepto clave de los sistemas de computación paralelos. El primer aspecto que define una red de interconexión es su topología. Habitualmente, las redes escalables y eficientes en términos de coste y consumo energético tienen bajo diámetro y se basan en topologías que encaran el límite de Moore y en las que no hay diversidad de caminos mínimos. Una vez definida la topología, quedando implícitamente definidos los límites de rendimiento de la red, es necesario diseñar un algoritmo de enrutamiento que se acerque lo máximo posible a esos límites y debido a la ausencia de caminos mínimos, este además debe explotar los caminos no mínimos cuando el tráfico es adverso. Estos algoritmos de enrutamiento habitualmente seleccionan entre rutas mínimas y no mínimas en base a las condiciones de la red. Las rutas no mínimas habitualmente se basan en el algoritmo de balanceo de carga propuesto por Valiant, esto implica que doblan la longitud de las rutas mínimas y por lo tanto, la latencia soportada por los paquetes se incrementa. En cuanto a la tecnología, desde su introducción en entornos HPC a principios de los años 2000, Ethernet ha sido usado en un porcentaje representativo de los sistemas. Esta tesis introduce una implementación realista y competitiva de una red escalable y sin pérdidas basada en dispositivos de red Ethernet commodity, considerando topologías de bajo diámetro y bajo consumo energético y logrando un ahorro energético de hasta un 54%. Además, propone un enrutamiento sobre la citada arquitectura, en adelante QCN-Switch, el cual selecciona entre rutas mínimas y no mínimas basado en notificaciones de congestión explícitas. Una vez implementada la decisión de enrutar siguiendo rutas no mínimas, se introduce un enrutamiento adaptativo en fuente capaz de adaptar el número de saltos en las rutas no mínimas. Este enrutamiento, en adelante ACOR, es agnóstico de la topología y mejora la latencia en hasta un 28%. Finalmente, se introduce un enrutamiento dependiente de la topología, en adelante LIAN, que optimiza el número de saltos de las rutas no mínimas basado en las condiciones de la red. Los resultados de su evaluación muestran que obtiene una latencia cuasi óptima y mejora el rendimiento de algoritmos de enrutamiento actuales reduciendo la latencia en hasta un 30% y obteniendo un rendimiento estable y equitativo.ABSTRACT: Interconnection network is a key concept of any parallel computing system. The first aspect to define an interconnection network is its topology. Typically, power and cost-efficient scalable networks with low diameter rely on topologies that approach the Moore bound in which there is no minimal path diversity. Once the topology is defined, the performance bounds of the network are determined consequently, so a suitable routing algorithm should be designed to accomplish as much as possible of those limits and, due to the lack of minimal path diversity, it must exploit non-minimal paths when the traffic pattern is adversarial. These routing algorithms usually select between minimal and non-minimal paths based on the network conditions, where the non-minimal paths are built according to Valiant load-balancing algorithm. This implies that these paths double the length of minimal ones and then the latency supported by packets increases. Regarding the technology, from its introduction in HPC systems in the early 2000s, Ethernet has been used in a significant fraction of the systems. This dissertation introduces a realistic and competitive implementation of a scalable lossless Ethernet network for HPC environments considering low-diameter and low-power topologies. This allows for up to 54% power savings. Furthermore, it proposes a routing upon the cited architecture, hereon QCN-Switch, which selects between minimal and non-minimal paths per packet based on explicit congestion notifications instead of credits. Once the miss-routing decision is implemented, it introduces two mechanisms regarding the selection of the intermediate switch to develop a source adaptive routing algorithm capable of adapting the number of hops in the non-minimal paths. This routing, hereon ACOR, is topology-agnostic and improves average latency in all cases up to 28%. Finally, a topology-dependent routing, hereon LIAN, is introduced to optimize the number of hops in the non-minimal paths based on the network live conditions. Evaluations show that LIAN obtains almost-optimal latency and outperforms state-of-the-art adaptive routing algorithms, reducing latency by up to 30.0% and providing stable throughput and fairness.This work has been supported by the Spanish Ministry of Education, Culture and Sports under grant FPU14/02253, the Spanish Ministry of Economy, Industry and Competitiveness under contracts TIN2010-21291-C02-02, TIN2013-46957-C2-2-P, and TIN2013-46957-C2-2-P (AEI/FEDER, UE), the Spanish Research Agency under contract PID2019-105660RBC22/AEI/10.13039/501100011033, the European Union under agreements FP7-ICT-2011- 7-288777 (Mont-Blanc 1) and FP7-ICT-2013-10-610402 (Mont-Blanc 2), the University of Cantabria under project PAR.30.P072.64004, and by the European HiPEAC Network of Excellence through an internship grant supported by the European Union’s Horizon 2020 research and innovation program under grant agreement No. H2020-ICT-2015-687689

Reconfigurable Optically Interconnected Systems

With the immense growth of data consumption in today's data centers and high-performance computing systems driven by the constant influx of new applications, the network infrastructure supporting this demand is under increasing pressure to enable higher bandwidth, latency, and flexibility requirements. Optical interconnects, able to support high bandwidth wavelength division multiplexed signals with extreme energy efficiency, have become the basis for long-haul and metro-scale networks around the world, while photonic components are being rapidly integrated within rack and chip-scale systems. However, optical and photonic interconnects are not a direct replacement for electronic-based components. Rather, the integration of optical interconnects with electronic peripherals allows for unique functionalities that can improve the capacity, compute performance and flexibility of current state-of-the-art computing systems. This requires physical layer methodologies for their integration with electronic components, as well as system level control planes that incorporates the optical layer characteristics. This thesis explores various network architectures and the associated control plane, hardware infrastructure, and other supporting software modules needed to integrate silicon photonics and MEMS based optical switching into conventional datacom network systems ranging from intra-data center and high-performance computing systems to the metro-scale layer networks between data centers. In each of these systems, we demonstrate dynamic bandwidth steering and compute resource allocation capabilities to enable significant performance improvements. The key accomplishments of this thesis are as follows. In Part 1, we present high-performance computing network architectures that integrate silicon photonic switches for optical bandwidth steering, enabling multiple reconfigurable topologies that results in significant system performance improvements. As high-performance systems rely on increased parallelism by scaling up to greater numbers of processor nodes, communication between these nodes grows rapidly and the interconnection network becomes a bottleneck to the overall performance of the system. It has been observed that many scientific applications operating on high-performance computing systems cause highly skewed traffic over the network, congesting only a small percentage of the total available links while other links are underutilized. This mismatch of the traffic and the bandwidth allocation of the physical layer network presents the opportunity to optimize the bandwidth resource utilization of the system by using silicon photonic switches to perform bandwidth steering. This allows the individual processors to perform at their maximum compute potential and thereby improving the overall system performance. We show various testbeds that integrates both microring resonator and Mach-Zehnder based silicon photonic switches within Dragonfly and Fat-Tree topology networks built with conventional equipment, and demonstrate 30-60% reduction in execution time of real high-performance benchmark applications. Part 2 presents a flexible network architecture and control plane that enables autonomous bandwidth steering and IT resource provisioning capabilities between metro-scale geographically distributed data centers. It uses a software-defined control plane to autonomously provision both network and IT resources to support different quality of service requirements and optimizes resource utilization under dynamically changing load variations. By actively monitoring both the bandwidth utilization of the network and CPU or memory resources of the end hosts, the control plane autonomously provisions background or dynamic connections with different levels of quality of service using optical MEMS switching, as well as initializing live migrations of virtual machines to consolidate or distribute workload. Together these functionalities provide flexibility and maximize efficiency in processing and transferring data, and enables energy and cost savings by scaling down the system when resources are not needed. An experimental testbed of three data center nodes was built to demonstrate the feasibility of these capabilities. Part 3 presents Lightbridge, a communications platform specifically designed to provide a more seamless integration between processor nodes and an optically switched network. It addresses some of the crucial issues faced by the works presented in the previous chapters related to optical switching. When optical switches perform switching operations, they change the physical topology of the network, and they lack the capability to buffer packets, resulting in certain optical circuits being unavailable. This prompts the question of whether it is safe to transmit packets by end hosts at any given time. Lightbridge was developed to coordinate switching and routing of optical circuits across the network, by having the processors gain information about the current state of the optical network before transmitting packets, and being able to buffer packets when the optical circuit is not available. This part describes details of Lightbridge which is constituted by a loadable Linux kernel module along with other supporting modifications to the Linux kernel in order to achieve the necessary functionalities

Efficient Intra-Rack Resource Disaggregation for HPC Using Co-Packaged DWDM Photonics

The diversity of workload requirements and increasing hardware heterogeneity in emerging high performance computing (HPC) systems motivate resource disaggregation. Resource disaggregation allows compute and memory resources to be allocated individually as required to each workload. However, it is unclear how to efficiently realize this capability and cost-effectively meet the stringent bandwidth and latency requirements of HPC applications. To that end, we describe how modern photonics can be co-designed with modern HPC racks to implement flexible intra-rack resource disaggregation and fully meet the bit error rate (BER) and high escape bandwidth of all chip types in modern HPC racks. Our photonic-based disaggregated rack provides an average application speedup of 11% (46% maximum) for 25 CPU and 61% for 24 GPU benchmarks compared to a similar system that instead uses modern electronic switches for disaggregation. Using observed resource usage from a production system, we estimate that an iso-performance intra-rack disaggregated HPC system using photonics would require 4x fewer memory modules and 2x fewer NICs than a non-disaggregated baseline.Comment: 15 pages, 12 figures, 4 tables. Published in IEEE Cluster 202