Structure and content semantic similarity detection of eXtensible markup language documents using keys

XML (eXtensible Mark-up Language) has become the fundamental standard for efficient data management and exchange. Due to the widespread use of XML for describing and exchanging data on the web, XML-based comparison is central issues in database management and information retrieval. In fact, although many heterogeneous XML sources have similar content, they may be described using different tag names and structures. This work proposes a series of algorithms for detection of structural and content changes among XML data. The first is an algorithm called XDoI (XML Data Integration Based on Content and Structure Similarity Using Keys) that clusters XML documents into subtrees using leaf-node parents as clustering points. This algorithm matches subtrees using the key concept and compares unmatched subtrees for similarities in both content and structure. The experimental results show that this approach finds much more accurate matches with or without the presence of keys in the subtrees. A second algorithm proposed here is called XDI-CSSK (a system for detecting xml similarity in content and structure using relational database); it eliminates unnecessary clustering points using instance statistics and a taxonomic analyzer. As the number of subtrees to be compared is reduced, the overall execution time is reduced dramatically. Semantic similarity plays a crucial role in precise computational similarity measures. A third algorithm, called XML-SIM (structure and content semantic similarity detection using keys) is based on previous work to detect XML semantic similarity based on structure and content. This algorithm is an improvement over XDI-CSSK and XDoI in that it determines content similarity based on semantic structural similarity. In an experimental evaluation, it outperformed previous approaches in terms of both execution time and false positive rates. Information changes periodically; therefore, it is important to be able to detect changes among different versions of an XML document and use that information to identify semantic similarities. Finally, this work introduces an approach to detect XML similarity and thus to join XML document versions using a change detection mechanism. In this approach, subtree keys still play an important role in order to avoid unnecessary subtree comparisons within multiple versions of the same document. Real data sets from bibliographic domains demonstrate the effectiveness of all these algorithms --Abstract, page iv-v

Semantic Clustering of Genomic Documents using GO Terms as Feature Set

The biological databases generate huge volume of genomics and proteomics data. The sequence information is used by researches to find similarity of genes, proteins and to find other related information. The genomic sequence database consists of large number of attributes as annotations, represented for defining the sequences in Xml format. It is necessary to have proper mechanism to group the documents for information retrieval. Data mining techniques like clustering and classification methods can be used to group the documents. The objective of the paper is to analyze the set of keywords which can be represented as features for grouping the documents semantically. This paper focuses on clustering genomic documents based on both structural and content similarity .The structural similarity is found using structural path between the documents. The semantic similarity is found for the structurally similar documents. We have proposed a methodology to cluster the genomic documents using sequence attributes without using the sequence data. The sequence attributes for genomic documents are analyzed using Filter based feature selection methods to find the relevant feature set for grouping the similar documents. Based on the attribute ranking we have clustered the similar documents using All Keyword approach (KBA) and GO Terms based approach (GOTA). The experimental results of the clusters are validated for two approaches by inferring biological meaning using Gene Ontology. From the results it was inferred that all keywords based approach grouped documents based on the semantic meaning of Gene Ontology terms. The GO terms based approach grouped larger number of documents without considering any other keywords, which is semantically relevant which results in reducing the complexity of the attributes considered. We claim that using GO terms can alone be used as features set to group genomic documents with high similarity

A Progressive Clustering Algorithm to Group the XML Data by Structural and Semantic Similarity

Since the emergence in the popularity of XML for data representation and exchange over the Web, the distribution of XML documents has rapidly increased. It has become a challenge for researchers to turn these documents into a more useful information utility. In this paper, we introduce a novel clustering algorithm PCXSS that keeps the heterogeneous XML documents into various groups according to their similar structural and semantic representations. We develop a global criterion function CPSim that progressively measures the similarity between a XML document and existing clusters, ignoring the need to compute the similarity between two individual documents. The experimental analysis shows the method to be fast and accurate

XML Schema Clustering with Semantic and Hierarchical Similarity Measures

With the growing popularity of XML as the data representation language, collections of the XML data are exploded in numbers. The methods are required to manage and discover the useful information from them for the improved document handling. We present a schema clustering process by organising the heterogeneous XML schemas into various groups. The methodology considers not only the linguistic and the context of the elements but also the hierarchical structural similarity. We support our findings with experiments and analysis

XML Matchers: approaches and challenges

Schema Matching, i.e. the process of discovering semantic correspondences between concepts adopted in different data source schemas, has been a key topic in Database and Artificial Intelligence research areas for many years. In the past, it was largely investigated especially for classical database models (e.g., E/R schemas, relational databases, etc.). However, in the latest years, the widespread adoption of XML in the most disparate application fields pushed a growing number of researchers to design XML-specific Schema Matching approaches, called XML Matchers, aiming at finding semantic matchings between concepts defined in DTDs and XSDs. XML Matchers do not just take well-known techniques originally designed for other data models and apply them on DTDs/XSDs, but they exploit specific XML features (e.g., the hierarchical structure of a DTD/XSD) to improve the performance of the Schema Matching process. The design of XML Matchers is currently a well-established research area. The main goal of this paper is to provide a detailed description and classification of XML Matchers. We first describe to what extent the specificities of DTDs/XSDs impact on the Schema Matching task. Then we introduce a template, called XML Matcher Template, that describes the main components of an XML Matcher, their role and behavior. We illustrate how each of these components has been implemented in some popular XML Matchers. We consider our XML Matcher Template as the baseline for objectively comparing approaches that, at first glance, might appear as unrelated. The introduction of this template can be useful in the design of future XML Matchers. Finally, we analyze commercial tools implementing XML Matchers and introduce two challenging issues strictly related to this topic, namely XML source clustering and uncertainty management in XML Matchers.Comment: 34 pages, 8 tables, 7 figure

XML documents clustering using a tensor space model

The traditional Vector Space Model (VSM) is not able to represent both the structure and the content of XML documents. This paper introduces a novel method of representing XML documents in a Tensor Space Model (TSM) and then utilizing it for clustering. Empirical analysis shows that the proposed method is scalable for large-sized datasets; as well, the factorized matrices produced from the proposed method help to improve the quality of clusters through the enriched document representation of both structure and content information

Measuring the similarity of PML documents with RFID-based sensors

The Electronic Product Code (EPC) Network is an important part of the Internet of Things. The Physical Mark-Up Language (PML) is to represent and de-scribe data related to objects in EPC Network. The PML documents of each component to exchange data in EPC Network system are XML documents based on PML Core schema. For managing theses huge amount of PML documents of tags captured by Radio frequency identification (RFID) readers, it is inevitable to develop the high-performance technol-ogy, such as filtering and integrating these tag data. So in this paper, we propose an approach for meas-uring the similarity of PML documents based on Bayesian Network of several sensors. With respect to the features of PML, while measuring the similarity, we firstly reduce the redundancy data except information of EPC. On the basis of this, the Bayesian Network model derived from the structure of the PML documents being compared is constructed.Comment: International Journal of Ad Hoc and Ubiquitous Computin