High-Resolution Road Vehicle Collision Prediction for the City of Montreal

Road accidents are an important issue of our modern societies, responsible for millions of deaths and injuries every year in the world. In Quebec only, in 2018, road accidents are responsible for 359 deaths and 33 thousands of injuries. In this paper, we show how one can leverage open datasets of a city like Montreal, Canada, to create high-resolution accident prediction models, using big data analytics. Compared to other studies in road accident prediction, we have a much higher prediction resolution, i.e., our models predict the occurrence of an accident within an hour, on road segments defined by intersections. Such models could be used in the context of road accident prevention, but also to identify key factors that can lead to a road accident, and consequently, help elaborate new policies. We tested various machine learning methods to deal with the severe class imbalance inherent to accident prediction problems. In particular, we implemented the Balanced Random Forest algorithm, a variant of the Random Forest machine learning algorithm in Apache Spark. Interestingly, we found that in our case, Balanced Random Forest does not perform significantly better than Random Forest. Experimental results show that 85% of road vehicle collisions are detected by our model with a false positive rate of 13%. The examples identified as positive are likely to correspond to high-risk situations. In addition, we identify the most important predictors of vehicle collisions for the area of Montreal: the count of accidents on the same road segment during previous years, the temperature, the day of the year, the hour and the visibility

Machine Learning and Integrative Analysis of Biomedical Big Data.

Recent developments in high-throughput technologies have accelerated the accumulation of massive amounts of omics data from multiple sources: genome, epigenome, transcriptome, proteome, metabolome, etc. Traditionally, data from each source (e.g., genome) is analyzed in isolation using statistical and machine learning (ML) methods. Integrative analysis of multi-omics and clinical data is key to new biomedical discoveries and advancements in precision medicine. However, data integration poses new computational challenges as well as exacerbates the ones associated with single-omics studies. Specialized computational approaches are required to effectively and efficiently perform integrative analysis of biomedical data acquired from diverse modalities. In this review, we discuss state-of-the-art ML-based approaches for tackling five specific computational challenges associated with integrative analysis: curse of dimensionality, data heterogeneity, missing data, class imbalance and scalability issues

Multilevel Weighted Support Vector Machine for Classification on Healthcare Data with Missing Values

This work is motivated by the needs of predictive analytics on healthcare data as represented by Electronic Medical Records. Such data is invariably problematic: noisy, with missing entries, with imbalance in classes of interests, leading to serious bias in predictive modeling. Since standard data mining methods often produce poor performance measures, we argue for development of specialized techniques of data-preprocessing and classification. In this paper, we propose a new method to simultaneously classify large datasets and reduce the effects of missing values. It is based on a multilevel framework of the cost-sensitive SVM and the expected maximization imputation method for missing values, which relies on iterated regression analyses. We compare classification results of multilevel SVM-based algorithms on public benchmark datasets with imbalanced classes and missing values as well as real data in health applications, and show that our multilevel SVM-based method produces fast, and more accurate and robust classification results.Comment: arXiv admin note: substantial text overlap with arXiv:1503.0625