Characterizing Modular Ontologies

International audienceSince large monolithic ontologies are di cult to handle and reuse ontology modularization has attracted increasing attention. Several approaches and tools have been developed to support ontology modularization. Despite these e orts, a lack of knowledge about characteristics of modularly organized ontologies prevents further development. This work aims at characterizing modular ontologies. Therefore, we analyze existing modular ontologies by applying selected metrics from software engineering in order to identify recurring structures, i.e. patterns in modularly organized ontologies. The contribution is a set of four patterns which characterize modularly organized ontologies

Characterizing Modular Ontologies

International audienceSince large monolithic ontologies are di cult to handle and reuse ontology modularization has attracted increasing attention. Several approaches and tools have been developed to support ontology modularization. Despite these e orts, a lack of knowledge about characteristics of modularly organized ontologies prevents further development. This work aims at characterizing modular ontologies. Therefore, we analyze existing modular ontologies by applying selected metrics from software engineering in order to identify recurring structures, i.e. patterns in modularly organized ontologies. The contribution is a set of four patterns which characterize modularly organized ontologies

A platform for semantic web studies

The Semantic Web can be seen as a large, heterogeneous network of ontologies and semantic documents. Characterizing these ontologies, the way they relate and the way they are organized can help in better understanding how knowledge is produced and published online. It also provides new ways to explore and exploit this large collection of ontologies. In this paper, we present the foundation of a research platform for characterizing the Semantic Web, relying on the collection of ontologies and the functionalities provided by the Watson Semantic Web search engine. We more specifically focus on formalizing and monitoring relationships between ontologies online, considering a variety of different relations (similarity, versioning, agreement, modularity) and how they can help us obtaining meaningful overviews of the current state of the Semantic Web

Some Issues on Ontology Integration

The word integration has been used with different meanings in the ontology field. This article aims at clarifying the meaning of the word “integration” and presenting some of the relevant work done in integration. We identify three meanings of ontology “integration”: when building a new ontology reusing (by assembling, extending, specializing or adapting) other ontologies already available; when building an ontology by merging several ontologies into a single one that unifies all of them; when building an application using one or more ontologies. We discuss the different meanings of “integration”, identify the main characteristics of the three different processes and proposethree words to distinguish among those meanings:integration, merge and use

The Infectious Disease Ontology in the Age of COVID-19

The Infectious Disease Ontology (IDO) is a suite of interoperable ontology modules that aims to provide coverage of all aspects of the infectious disease domain, including biomedical research, clinical care, and public health. IDO Core is designed to be a disease and pathogen neutral ontology, covering just those types of entities and relations that are relevant to infectious diseases generally. IDO Core is then extended by a collection of ontology modules focusing on specific diseases and pathogens. In this paper we present applications of IDO Core within various areas of infectious disease research, together with an overview of all IDO extension ontologies and the methodology on the basis of which they are built. We also survey recent developments involving IDO, including the creation of IDO Virus; the Coronaviruses Infectious Disease Ontology (CIDO); and an extension of CIDO focused on COVID-19 (IDO-CovID-19).We also discuss how these ontologies might assist in information-driven efforts to deal with the ongoing COVID-19 pandemic, to accelerate data discovery in the early stages of future pandemics, and to promote reproducibility of infectious disease research

A reconstruction of the multipreference closure

The paper describes a preferential approach for dealing with exceptions in KLM preferential logics, based on the rational closure. It is well known that the rational closure does not allow an independent handling of the inheritance of different defeasible properties of concepts. Several solutions have been proposed to face this problem and the lexicographic closure is the most notable one. In this work, we consider an alternative closure construction, called the Multi Preference closure (MP-closure), that has been first considered for reasoning with exceptions in DLs. Here, we reconstruct the notion of MP-closure in the propositional case and we show that it is a natural variant of Lehmann's lexicographic closure. Abandoning Maximal Entropy (an alternative route already considered but not explored by Lehmann) leads to a construction which exploits a different lexicographic ordering w.r.t. the lexicographic closure, and determines a preferential consequence relation rather than a rational consequence relation. We show that, building on the MP-closure semantics, rationality can be recovered, at least from the semantic point of view, resulting in a rational consequence relation which is stronger than the rational closure, but incomparable with the lexicographic closure. We also show that the MP-closure is stronger than the Relevant Closure.Comment: 57 page

The Distributed Ontology Language (DOL): Use Cases, Syntax, and Extensibility

The Distributed Ontology Language (DOL) is currently being standardized within the OntoIOp (Ontology Integration and Interoperability) activity of ISO/TC 37/SC 3. It aims at providing a unified framework for (1) ontologies formalized in heterogeneous logics, (2) modular ontologies, (3) links between ontologies, and (4) annotation of ontologies. This paper presents the current state of DOL's standardization. It focuses on use cases where distributed ontologies enable interoperability and reusability. We demonstrate relevant features of the DOL syntax and semantics and explain how these integrate into existing knowledge engineering environments.Comment: Terminology and Knowledge Engineering Conference (TKE) 2012-06-20 to 2012-06-21 Madrid, Spai

PlanetOnto: from news publishing to integrated knowledge management support

Given a scenario in which members of an academic community collaboratively construct and share an archive of news items, several knowledge management challenges arise. The authors' integrated suite of tools, called PlanetOnto, supports a speedy but high quality publishing process, allows ontology-driven document formalization and augments standard browsing and search facilities with deductive knowledge retrieva

Reusing domain ontologies in linked building data : the case of building automation and control

Linked data and semantic web technologies are gaining impact and importance in the Architecture, Engineering, Construction and Facility Management (AEC/FM) industry. Whereas we have seen a strong technological shift with the emergence of Building Information Modeling (BIM) tools, this second technological shift to the exchange and management of building data over the web might be even stronger than the first one. In order to make this a success, the AEC/FM industry will need strong and appropriate ontologies, as they will allow industry practitioners to structure their data in a commonly agreed format and exchange the data. Herein, we look at the ontologies that are emerging in the area of Building Automation and Control Systems (BACS). We propose a BACS ontology in strong alignment with existing ontologies and evaluate how it can be used for capturing automation and control systems of a building by modeling a use case