21,765 research outputs found
Factorial graphical lasso for dynamic networks
Dynamic networks models describe a growing number of important scientific
processes, from cell biology and epidemiology to sociology and finance. There
are many aspects of dynamical networks that require statistical considerations.
In this paper we focus on determining network structure. Estimating dynamic
networks is a difficult task since the number of components involved in the
system is very large. As a result, the number of parameters to be estimated is
bigger than the number of observations. However, a characteristic of many
networks is that they are sparse. For example, the molecular structure of genes
make interactions with other components a highly-structured and therefore
sparse process.
Penalized Gaussian graphical models have been used to estimate sparse
networks. However, the literature has focussed on static networks, which lack
specific temporal constraints. We propose a structured Gaussian dynamical
graphical model, where structures can consist of specific time dynamics, known
presence or absence of links and block equality constraints on the parameters.
Thus, the number of parameters to be estimated is reduced and accuracy of the
estimates, including the identification of the network, can be tuned up. Here,
we show that the constrained optimization problem can be solved by taking
advantage of an efficient solver, logdetPPA, developed in convex optimization.
Moreover, model selection methods for checking the sensitivity of the inferred
networks are described. Finally, synthetic and real data illustrate the
proposed methodologies.Comment: 30 pp, 5 figure
Consistency of Spectral Hypergraph Partitioning under Planted Partition Model
Hypergraph partitioning lies at the heart of a number of problems in machine
learning and network sciences. Many algorithms for hypergraph partitioning have
been proposed that extend standard approaches for graph partitioning to the
case of hypergraphs. However, theoretical aspects of such methods have seldom
received attention in the literature as compared to the extensive studies on
the guarantees of graph partitioning. For instance, consistency results of
spectral graph partitioning under the stochastic block model are well known. In
this paper, we present a planted partition model for sparse random non-uniform
hypergraphs that generalizes the stochastic block model. We derive an error
bound for a spectral hypergraph partitioning algorithm under this model using
matrix concentration inequalities. To the best of our knowledge, this is the
first consistency result related to partitioning non-uniform hypergraphs.Comment: 35 pages, 2 figures, 1 tabl
On Strong Diameter Padded Decompositions
Given a weighted graph G=(V,E,w), a partition of V is Delta-bounded if the diameter of each cluster is bounded by Delta. A distribution over Delta-bounded partitions is a beta-padded decomposition if every ball of radius gamma Delta is contained in a single cluster with probability at least e^{-beta * gamma}. The weak diameter of a cluster C is measured w.r.t. distances in G, while the strong diameter is measured w.r.t. distances in the induced graph G[C]. The decomposition is weak/strong according to the diameter guarantee.
Formerly, it was proven that K_r free graphs admit weak decompositions with padding parameter O(r), while for strong decompositions only O(r^2) padding parameter was known. Furthermore, for the case of a graph G, for which the induced shortest path metric d_G has doubling dimension ddim, a weak O(ddim)-padded decomposition was constructed, which is also known to be tight. For the case of strong diameter, nothing was known.
We construct strong O(r)-padded decompositions for K_r free graphs, matching the state of the art for weak decompositions. Similarly, for graphs with doubling dimension ddim we construct a strong O(ddim)-padded decomposition, which is also tight. We use this decomposition to construct (O(ddim),O~(ddim))-sparse cover scheme for such graphs. Our new decompositions and cover have implications to approximating unique games, the construction of light and sparse spanners, and for path reporting distance oracles
An theory of sparse graph convergence I: limits, sparse random graph models, and power law distributions
We introduce and develop a theory of limits for sequences of sparse graphs
based on graphons, which generalizes both the existing theory
of dense graph limits and its extension by Bollob\'as and Riordan to sparse
graphs without dense spots. In doing so, we replace the no dense spots
hypothesis with weaker assumptions, which allow us to analyze graphs with power
law degree distributions. This gives the first broadly applicable limit theory
for sparse graphs with unbounded average degrees. In this paper, we lay the
foundations of the theory of graphons, characterize convergence, and
develop corresponding random graph models, while we prove the equivalence of
several alternative metrics in a companion paper.Comment: 44 page
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