8,314 research outputs found
Biologically plausible deep learning -- but how far can we go with shallow networks?
Training deep neural networks with the error backpropagation algorithm is
considered implausible from a biological perspective. Numerous recent
publications suggest elaborate models for biologically plausible variants of
deep learning, typically defining success as reaching around 98% test accuracy
on the MNIST data set. Here, we investigate how far we can go on digit (MNIST)
and object (CIFAR10) classification with biologically plausible, local learning
rules in a network with one hidden layer and a single readout layer. The hidden
layer weights are either fixed (random or random Gabor filters) or trained with
unsupervised methods (PCA, ICA or Sparse Coding) that can be implemented by
local learning rules. The readout layer is trained with a supervised, local
learning rule. We first implement these models with rate neurons. This
comparison reveals, first, that unsupervised learning does not lead to better
performance than fixed random projections or Gabor filters for large hidden
layers. Second, networks with localized receptive fields perform significantly
better than networks with all-to-all connectivity and can reach backpropagation
performance on MNIST. We then implement two of the networks - fixed, localized,
random & random Gabor filters in the hidden layer - with spiking leaky
integrate-and-fire neurons and spike timing dependent plasticity to train the
readout layer. These spiking models achieve > 98.2% test accuracy on MNIST,
which is close to the performance of rate networks with one hidden layer
trained with backpropagation. The performance of our shallow network models is
comparable to most current biologically plausible models of deep learning.
Furthermore, our results with a shallow spiking network provide an important
reference and suggest the use of datasets other than MNIST for testing the
performance of future models of biologically plausible deep learning.Comment: 14 pages, 4 figure
Spiking neurons with short-term synaptic plasticity form superior generative networks
Spiking networks that perform probabilistic inference have been proposed both
as models of cortical computation and as candidates for solving problems in
machine learning. However, the evidence for spike-based computation being in
any way superior to non-spiking alternatives remains scarce. We propose that
short-term plasticity can provide spiking networks with distinct computational
advantages compared to their classical counterparts. In this work, we use
networks of leaky integrate-and-fire neurons that are trained to perform both
discriminative and generative tasks in their forward and backward information
processing paths, respectively. During training, the energy landscape
associated with their dynamics becomes highly diverse, with deep attractor
basins separated by high barriers. Classical algorithms solve this problem by
employing various tempering techniques, which are both computationally
demanding and require global state updates. We demonstrate how similar results
can be achieved in spiking networks endowed with local short-term synaptic
plasticity. Additionally, we discuss how these networks can even outperform
tempering-based approaches when the training data is imbalanced. We thereby
show how biologically inspired, local, spike-triggered synaptic dynamics based
simply on a limited pool of synaptic resources can allow spiking networks to
outperform their non-spiking relatives.Comment: corrected typo in abstrac
Multi-stage Multi-recursive-input Fully Convolutional Networks for Neuronal Boundary Detection
In the field of connectomics, neuroscientists seek to identify cortical
connectivity comprehensively. Neuronal boundary detection from the Electron
Microscopy (EM) images is often done to assist the automatic reconstruction of
neuronal circuit. But the segmentation of EM images is a challenging problem,
as it requires the detector to be able to detect both filament-like thin and
blob-like thick membrane, while suppressing the ambiguous intracellular
structure. In this paper, we propose multi-stage multi-recursive-input fully
convolutional networks to address this problem. The multiple recursive inputs
for one stage, i.e., the multiple side outputs with different receptive field
sizes learned from the lower stage, provide multi-scale contextual boundary
information for the consecutive learning. This design is
biologically-plausible, as it likes a human visual system to compare different
possible segmentation solutions to address the ambiguous boundary issue. Our
multi-stage networks are trained end-to-end. It achieves promising results on
two public available EM segmentation datasets, the mouse piriform cortex
dataset and the ISBI 2012 EM dataset.Comment: Accepted by ICCV201
Rapid Visual Categorization is not Guided by Early Salience-Based Selection
The current dominant visual processing paradigm in both human and machine
research is the feedforward, layered hierarchy of neural-like processing
elements. Within this paradigm, visual saliency is seen by many to have a
specific role, namely that of early selection. Early selection is thought to
enable very fast visual performance by limiting processing to only the most
salient candidate portions of an image. This strategy has led to a plethora of
saliency algorithms that have indeed improved processing time efficiency in
machine algorithms, which in turn have strengthened the suggestion that human
vision also employs a similar early selection strategy. However, at least one
set of critical tests of this idea has never been performed with respect to the
role of early selection in human vision. How would the best of the current
saliency models perform on the stimuli used by experimentalists who first
provided evidence for this visual processing paradigm? Would the algorithms
really provide correct candidate sub-images to enable fast categorization on
those same images? Do humans really need this early selection for their
impressive performance? Here, we report on a new series of tests of these
questions whose results suggest that it is quite unlikely that such an early
selection process has any role in human rapid visual categorization.Comment: 22 pages, 9 figure
Contrastive Hebbian Learning with Random Feedback Weights
Neural networks are commonly trained to make predictions through learning
algorithms. Contrastive Hebbian learning, which is a powerful rule inspired by
gradient backpropagation, is based on Hebb's rule and the contrastive
divergence algorithm. It operates in two phases, the forward (or free) phase,
where the data are fed to the network, and a backward (or clamped) phase, where
the target signals are clamped to the output layer of the network and the
feedback signals are transformed through the transpose synaptic weight
matrices. This implies symmetries at the synaptic level, for which there is no
evidence in the brain. In this work, we propose a new variant of the algorithm,
called random contrastive Hebbian learning, which does not rely on any synaptic
weights symmetries. Instead, it uses random matrices to transform the feedback
signals during the clamped phase, and the neural dynamics are described by
first order non-linear differential equations. The algorithm is experimentally
verified by solving a Boolean logic task, classification tasks (handwritten
digits and letters), and an autoencoding task. This article also shows how the
parameters affect learning, especially the random matrices. We use the
pseudospectra analysis to investigate further how random matrices impact the
learning process. Finally, we discuss the biological plausibility of the
proposed algorithm, and how it can give rise to better computational models for
learning
Bayesian hierarchical clustering for studying cancer gene expression data with unknown statistics
Clustering analysis is an important tool in studying gene expression data. The Bayesian hierarchical clustering (BHC) algorithm can automatically infer the number of clusters and uses Bayesian model selection to improve clustering quality. In this paper, we present an extension of the BHC algorithm. Our Gaussian BHC (GBHC) algorithm represents data as a mixture of Gaussian distributions. It uses normal-gamma distribution as a conjugate prior on the mean and precision of each of the Gaussian components. We tested GBHC over 11 cancer and 3 synthetic datasets. The results on cancer datasets show that in sample clustering, GBHC on average produces a clustering partition that is more concordant with the ground truth than those obtained from other commonly used algorithms. Furthermore, GBHC frequently infers the number of clusters that is often close to the ground truth. In gene clustering, GBHC also produces a clustering partition that is more biologically plausible than several other state-of-the-art methods. This suggests GBHC as an alternative tool for studying gene expression data. The implementation of GBHC is available at https://sites.
google.com/site/gaussianbhc
A Neural Model for Self Organizing Feature Detectors and Classifiers in a Network Hierarchy
Many models of early cortical processing have shown how local learning rules can produce efficient, sparse-distributed codes in which nodes have responses that are statistically independent and low probability. However, it is not known how to develop a useful hierarchical representation, containing sparse-distributed codes at each level of the hierarchy, that incorporates predictive feedback from the environment. We take a step in that direction by proposing a biologically plausible neural network model that develops receptive fields, and learns to make class predictions, with or without the help of environmental feedback. The model is a new type of predictive adaptive resonance theory network called Receptive Field ARTMAP, or RAM. RAM self organizes internal category nodes that are tuned to activity distributions in topographic input maps. Each receptive field is composed of multiple weight fields that are adapted via local, on-line learning, to form smooth receptive ftelds that reflect; the statistics of the activity distributions in the input maps. When RAM generates incorrect predictions, its vigilance is raised, amplifying subtractive inhibition and sharpening receptive fields until the error is corrected. Evaluation on several classification benchmarks shows that RAM outperforms a related (but neurally implausible) model called Gaussian ARTMAP, as well as several standard neural network and statistical classifters. A topographic version of RAM is proposed, which is capable of self organizing hierarchical representations. Topographic RAM is a model for receptive field development at any level of the cortical hierarchy, and provides explanations for a variety of perceptual learning data.Defense Advanced Research Projects Agency and Office of Naval Research (N00014-95-1-0409
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