Convolutional Sparse Kernel Network for Unsupervised Medical Image Analysis

The availability of large-scale annotated image datasets and recent advances in supervised deep learning methods enable the end-to-end derivation of representative image features that can impact a variety of image analysis problems. Such supervised approaches, however, are difficult to implement in the medical domain where large volumes of labelled data are difficult to obtain due to the complexity of manual annotation and inter- and intra-observer variability in label assignment. We propose a new convolutional sparse kernel network (CSKN), which is a hierarchical unsupervised feature learning framework that addresses the challenge of learning representative visual features in medical image analysis domains where there is a lack of annotated training data. Our framework has three contributions: (i) We extend kernel learning to identify and represent invariant features across image sub-patches in an unsupervised manner. (ii) We initialise our kernel learning with a layer-wise pre-training scheme that leverages the sparsity inherent in medical images to extract initial discriminative features. (iii) We adapt a multi-scale spatial pyramid pooling (SPP) framework to capture subtle geometric differences between learned visual features. We evaluated our framework in medical image retrieval and classification on three public datasets. Our results show that our CSKN had better accuracy when compared to other conventional unsupervised methods and comparable accuracy to methods that used state-of-the-art supervised convolutional neural networks (CNNs). Our findings indicate that our unsupervised CSKN provides an opportunity to leverage unannotated big data in medical imaging repositories.Comment: Accepted by Medical Image Analysis (with a new title 'Convolutional Sparse Kernel Network for Unsupervised Medical Image Analysis'). The manuscript is available from following link (https://doi.org/10.1016/j.media.2019.06.005

CNN Features off-the-shelf: an Astounding Baseline for Recognition

Recent results indicate that the generic descriptors extracted from the convolutional neural networks are very powerful. This paper adds to the mounting evidence that this is indeed the case. We report on a series of experiments conducted for different recognition tasks using the publicly available code and model of the \overfeat network which was trained to perform object classification on ILSVRC13. We use features extracted from the \overfeat network as a generic image representation to tackle the diverse range of recognition tasks of object image classification, scene recognition, fine grained recognition, attribute detection and image retrieval applied to a diverse set of datasets. We selected these tasks and datasets as they gradually move further away from the original task and data the \overfeat network was trained to solve. Astonishingly, we report consistent superior results compared to the highly tuned state-of-the-art systems in all the visual classification tasks on various datasets. For instance retrieval it consistently outperforms low memory footprint methods except for sculptures dataset. The results are achieved using a linear SVM classifier (or $L2$ distance in case of retrieval) applied to a feature representation of size 4096 extracted from a layer in the net. The representations are further modified using simple augmentation techniques e.g. jittering. The results strongly suggest that features obtained from deep learning with convolutional nets should be the primary candidate in most visual recognition tasks.Comment: version 3 revisions: 1)Added results using feature processing and data augmentation 2)Referring to most recent efforts of using CNN for different visual recognition tasks 3) updated text/captio

Recent Advances in Transfer Learning for Cross-Dataset Visual Recognition: A Problem-Oriented Perspective

This paper takes a problem-oriented perspective and presents a comprehensive review of transfer learning methods, both shallow and deep, for cross-dataset visual recognition. Specifically, it categorises the cross-dataset recognition into seventeen problems based on a set of carefully chosen data and label attributes. Such a problem-oriented taxonomy has allowed us to examine how different transfer learning approaches tackle each problem and how well each problem has been researched to date. The comprehensive problem-oriented review of the advances in transfer learning with respect to the problem has not only revealed the challenges in transfer learning for visual recognition, but also the problems (e.g. eight of the seventeen problems) that have been scarcely studied. This survey not only presents an up-to-date technical review for researchers, but also a systematic approach and a reference for a machine learning practitioner to categorise a real problem and to look up for a possible solution accordingly

A Discriminative Representation of Convolutional Features for Indoor Scene Recognition

Indoor scene recognition is a multi-faceted and challenging problem due to the diverse intra-class variations and the confusing inter-class similarities. This paper presents a novel approach which exploits rich mid-level convolutional features to categorize indoor scenes. Traditionally used convolutional features preserve the global spatial structure, which is a desirable property for general object recognition. However, we argue that this structuredness is not much helpful when we have large variations in scene layouts, e.g., in indoor scenes. We propose to transform the structured convolutional activations to another highly discriminative feature space. The representation in the transformed space not only incorporates the discriminative aspects of the target dataset, but it also encodes the features in terms of the general object categories that are present in indoor scenes. To this end, we introduce a new large-scale dataset of 1300 object categories which are commonly present in indoor scenes. Our proposed approach achieves a significant performance boost over previous state of the art approaches on five major scene classification datasets

Data Driven Approaches for Image & Video Understanding: from Traditional to Zero-shot Supervised Learning

In the present age of advanced computer vision, the necessity of (user-annotated) data is a key factor in image & video understanding. Recent success of deep learning on large scale data has only acted as a catalyst. There are certain problems that exist in this regard: 1) scarcity of (annotated) data, 2) need of expensive manual annotation, 3) problem of change in domain, 4) knowledge base not exhaustive. To make efficient learning systems, one has to be prepared to deal with such diverse set of problems. In terms of data availability, extensive manual annotation can be beneficial in obtaining category specific knowledge. Even then, learning efficient representation for the related task is challenging and requires special attention. On the other hand, when labelled data is scarce, learning category specific representation itself becomes challenging. In this work, I investigate data driven approaches that cater to traditional supervised learning setup as well as an extreme case of data scarcity where no data from test classes are available during training, known as zero-shot learning. First, I look into supervised learning setup with ample annotations and propose efficient dictionary learning technique for better learning of data representation for the task of action classification in images & videos. Then I propose robust mid-level feature representations for action videos that are equally effective in traditional supervised learning as well as zero-shot learning. Finally, I come up with novel approach that cater to zero-shot learning specifically. Thorough discussions followed by experimental validations establish the worth of these novel techniques in solving computer vision related tasks under varying data-dependent scenarios