Hybrid group anomaly detection for sequence data: application to trajectory data analytics

Many research areas depend on group anomaly detection. The use of group anomaly detection can maintain and provide security and privacy to the data involved. This research attempts to solve the deficiency of the existing literature in outlier detection thus a novel hybrid framework to identify group anomaly detection from sequence data is proposed in this paper. It proposes two approaches for efficiently solving this problem: i) Hybrid Data Mining-based algorithm, consists of three main phases: first, the clustering algorithm is applied to derive the micro-clusters. Second, the kNN algorithm is applied to each micro-cluster to calculate the candidates of the group's outliers. Third, a pattern mining framework gets applied to the candidates of the group's outliers as a pruning strategy, to generate the groups of outliers, and ii) a GPU-based approach is presented, which benefits from the massively GPU computing to boost the runtime of the hybrid data mining-based algorithm. Extensive experiments were conducted to show the advantages of different sequence databases of our proposed model. Results clearly show the efficiency of a GPU direction when directly compared to a sequential approach by reaching a speedup of 451. In addition, both approaches outperform the baseline methods for group detection.acceptedVersio

SpecHD: Hyperdimensional Computing Framework for FPGA-based Mass Spectrometry Clustering

Mass spectrometry-based proteomics is a key enabler for personalized healthcare, providing a deep dive into the complex protein compositions of biological systems. This technology has vast applications in biotechnology and biomedicine but faces significant computational bottlenecks. Current methodologies often require multiple hours or even days to process extensive datasets, particularly in the domain of spectral clustering. To tackle these inefficiencies, we introduce SpecHD, a hyperdimensional computing (HDC) framework supplemented by an FPGA-accelerated architecture with integrated near-storage preprocessing. Utilizing streamlined binary operations in an HDC environment, SpecHD capitalizes on the low-latency and parallel capabilities of FPGAs. This approach markedly improves clustering speed and efficiency, serving as a catalyst for real-time, high-throughput data analysis in future healthcare applications. Our evaluations demonstrate that SpecHD not only maintains but often surpasses existing clustering quality metrics while drastically cutting computational time. Specifically, it can cluster a large-scale human proteome dataset-comprising 25 million MS/MS spectra and 131 GB of MS data-in just 5 minutes. With energy efficiency exceeding 31x and a speedup factor that spans a range of 6x to 54x over existing state of-the-art solutions, SpecHD emerges as a promising solution for the rapid analysis of mass spectrometry data with great implications for personalized healthcare

Exploring Decomposition for Solving Pattern Mining Problems

This article introduces a highly efficient pattern mining technique called Clustering-based Pattern Mining (CBPM). This technique discovers relevant patterns by studying the correlation between transactions in the transaction database based on clustering techniques. The set of transactions is first clustered, such that highly correlated transactions are grouped together. Next, we derive the relevant patterns by applying a pattern mining algorithm to each cluster. We present two different pattern mining algorithms, one applying an approximation-based strategy and another based on an exact strategy. The approximation-based strategy takes into account only the clusters, whereas the exact strategy takes into account both clusters and shared items between clusters. To boost the performance of the CBPM, a GPU-based implementation is investigated. To evaluate the CBPM framework, we perform extensive experiments on several pattern mining problems. The results from the experimental evaluation show that the CBPM provides a reduction in both the runtime and memory usage. Also, CBPM based on the approximate strategy provides good accuracy, demonstrating its effectiveness and feasibility. Our GPU implementation achieves significant speedup of up to 552× on a single GPU using big transaction databases.publishedVersio