Data generator for evaluating ETL process quality

Obtaining the right set of data for evaluating the fulfillment of different quality factors in the extract-transform-load (ETL) process design is rather challenging. First, the real data might be out of reach due to different privacy constraints, while manually providing a synthetic set of data is known as a labor-intensive task that needs to take various combinations of process parameters into account. More importantly, having a single dataset usually does not represent the evolution of data throughout the complete process lifespan, hence missing the plethora of possible test cases. To facilitate such demanding task, in this paper we propose an automatic data generator (i.e., Bijoux). Starting from a given ETL process model, Bijoux extracts the semantics of data transformations, analyzes the constraints they imply over input data, and automatically generates testing datasets. Bijoux is highly modular and configurable to enable end-users to generate datasets for a variety of interesting test scenarios (e.g., evaluating specific parts of an input ETL process design, with different input dataset sizes, different distributions of data, and different operation selectivities). We have developed a running prototype that implements the functionality of our data generation framework and here we report our experimental findings showing the effectiveness and scalability of our approach.Peer ReviewedPostprint (author's final draft

A polynomial delay algorithm for the enumeration of bubbles with length constraints in directed graphs and its application to the detection of alternative splicing in RNA-seq data

We present a new algorithm for enumerating bubbles with length constraints in directed graphs. This problem arises in transcriptomics, where the question is to identify all alternative splicing events present in a sample of mRNAs sequenced by RNA-seq. This is the first polynomial-delay algorithm for this problem and we show that in practice, it is faster than previous approaches. This enables us to deal with larger instances and therefore to discover novel alternative splicing events, especially long ones, that were previously overseen using existing methods.Comment: Peer-reviewed and presented as part of the 13th Workshop on Algorithms in Bioinformatics (WABI2013

Bridging the gap between design and implementation of components libraries

Object-oriented design is usually driven by three main reusability principles: step-by-step design, design for reuse and design with reuse. However, these principles are just partially applied to the subsequent object-oriented implementation, often due to efficienc y constraints, yielding to a gap between design and implementation. In this paper we provide a solution for bridging this gap for a concrete framework, the one of designing and implementing container-like component libraries, such as STL, Booc h Components, etc. Our approach is based on a new design pattern together with its corresponding implementation. The proposal enhances the same principles that drive the design process: step-by--step implementation (adding just what is needed in every step), implementation with reuse (component implementations are reused while library implementation progresses and component hierarchies grow) and implementation for reuse (intermediate component implementations can be reused in many different points o f the hierarchy). We use our approach in two different manners: for building a brand-new container-like component library, and for reengineering an existing one, Booch Components in Ada95.Postprint (published version

Segment Routing: a Comprehensive Survey of Research Activities, Standardization Efforts and Implementation Results

Fixed and mobile telecom operators, enterprise network operators and cloud providers strive to face the challenging demands coming from the evolution of IP networks (e.g. huge bandwidth requirements, integration of billions of devices and millions of services in the cloud). Proposed in the early 2010s, Segment Routing (SR) architecture helps face these challenging demands, and it is currently being adopted and deployed. SR architecture is based on the concept of source routing and has interesting scalability properties, as it dramatically reduces the amount of state information to be configured in the core nodes to support complex services. SR architecture was first implemented with the MPLS dataplane and then, quite recently, with the IPv6 dataplane (SRv6). IPv6 SR architecture (SRv6) has been extended from the simple steering of packets across nodes to a general network programming approach, making it very suitable for use cases such as Service Function Chaining and Network Function Virtualization. In this paper we present a tutorial and a comprehensive survey on SR technology, analyzing standardization efforts, patents, research activities and implementation results. We start with an introduction on the motivations for Segment Routing and an overview of its evolution and standardization. Then, we provide a tutorial on Segment Routing technology, with a focus on the novel SRv6 solution. We discuss the standardization efforts and the patents providing details on the most important documents and mentioning other ongoing activities. We then thoroughly analyze research activities according to a taxonomy. We have identified 8 main categories during our analysis of the current state of play: Monitoring, Traffic Engineering, Failure Recovery, Centrally Controlled Architectures, Path Encoding, Network Programming, Performance Evaluation and Miscellaneous...Comment: SUBMITTED TO IEEE COMMUNICATIONS SURVEYS & TUTORIAL