Crop monitoring and yield estimation using polarimetric SAR and optical satellite data in southwestern Ontario

Optical satellite data have been proven as an efficient source to extract crop information and monitor crop growth conditions over large areas. In local- to subfield-scale crop monitoring studies, both high spatial resolution and high temporal resolution of the image data are important. However, the acquisition of optical data is limited by the constant contamination of clouds in cloudy areas. This thesis explores the potential of polarimetric Synthetic Aperture Radar (SAR) satellite data and the spatio-temporal data fusion approach in crop monitoring and yield estimation applications in southwestern Ontario. Firstly, the sensitivity of 16 parameters derived from C-band Radarsat-2 polarimetric SAR data to crop height and fractional vegetation cover (FVC) was investigated. The results show that the SAR backscatters are affected by many factors unrelated to the crop canopy such as the incidence angle and the soil background and the degree of sensitivity varies with the crop types, growing stages, and the polarimetric SAR parameters. Secondly, the Minimum Noise Fraction (MNF) transformation, for the first time, was applied to multitemporal Radarsat-2 polarimetric SAR data in cropland area mapping based on the random forest classifier. An overall classification accuracy of 95.89% was achieved using the MNF transformation of the multi-temporal coherency matrix acquired from July to November. Then, a spatio-temporal data fusion method was developed to generate Normalized Difference Vegetation Index (NDVI) time series with both high spatial and high temporal resolution in heterogeneous regions using Landsat and MODIS imagery. The proposed method outperforms two other widely used methods. Finally, an improved crop phenology detection method was proposed, and the phenology information was then forced into the Simple Algorithm for Yield Estimation (SAFY) model to estimate crop biomass and yield. Compared with the SAFY model without forcing the remotely sensed phenology and a simple light use efficiency (LUE) model, the SAFY incorporating the remotely sensed phenology can improve the accuracy of biomass estimation by about 4% in relative Root Mean Square Error (RRMSE). The studies in this thesis improve the ability to monitor crop growth status and production at subfield scale

Soil moisture retrieval over agricultural fields from L-band multi-incidence and multitemporal PolSAR observations using polarimetric decomposition techniques

Surface soil moisture (SM) retrieval over agricultural areas from polarimetric synthetic aperture radar (PolSAR) has long been restricted by vegetation attenuation, simplified polarimetric scattering modelling, and limited SAR measurements. This study proposes a modified polarimetric decomposition framework to retrieve SM from multi-incidence and multitemporal PolSAR observations. The framework is constructed by combining the X-Bragg model, the extended double Fresnel scattering model and the generalised volume scattering model (GVSM). Compared with traditional decomposition models, the proposed framework considers the depolarisation of dihedral scattering and the diverse vegetation contribution. Under the assumption that SM is invariant for the PolSAR observations at two different incidence angles and that vegetation scattering does not change between two consecutive measurements, analytical parameter solutions, including the dielectric constant of soil and crop stem, can be obtained by solving multivariable nonlinear equations. The proposed framework is applied to the time series of L-band uninhabited aerial vehicle synthetic aperture radar data acquired during the Soil Moisture Active Passive Validation Experiment in 2012. In this study, we assess retrieval performance by comparing the inversion results with in-situ measurements over bean, canola, corn, soybean, wheat and winter wheat areas and comparing the different performance of SM retrieval between the GVSM and Yamaguchi volume scattering models. Given that SM estimation is inherently influenced by crop phenology and empirical parameters which are introduced in the scattering models, we also investigate the influence of surface depolarisation angle and co-pol phase difference on SM estimation. Results show that the proposed retrieval framework provides an inversion accuracy of RMSE<6.0% and a correlation of R≥0.6 with an inversion rate larger than 90%. Over wheat and winter wheat fields, a correlation of 0.8 between SM estimates and measurements is observed when the surface scattering is dominant. Specifically, stem permittivity, which is retrieved synchronously with SM also shows a linear relationship with crop biomass and plant water content over bean, corn, soybean and wheat fields. We also find that a priori knowledge of surface depolarisation angle, co-pol phase difference and adaptive volume scattering could help to improve the performance of the proposed SM retrieval framework. However, the GVSM model is still not fully adaptive because the co-pol power ratio of volume scattering is potentially influenced by ground scattering.This work was supported by the National Natural Science Foundation of China [grant numbers 61971318, 41771377, 41901286, 42071295, 41901284, U2033216]; the China Postdoctoral Science Foundation [grant number 2018M642914]. This work was supported in part by the Spanish Ministry of Science and Innovation, the State Agency of Research (AEI), and the European Funds for Regional Development (EFRD) under Project TEC2017-85244-C2-1-P

Application Of Polarimetric SAR For Surface Parameter Inversion And Land Cover Mapping Over Agricultural Areas

In this thesis, novel methodology is developed to extract surface parameters under vegetation cover and to map crop types, from the polarimetric Synthetic Aperture Radar (PolSAR) images over agricultural areas. The extracted surface parameters provide crucial information for monitoring crop growth, nutrient release efficiency, water capacity, and crop production. To estimate surface parameters, it is essential to remove the volume scattering caused by the crop canopy, which makes developing an efficient volume scattering model very critical. In this thesis, a simplified adaptive volume scattering model (SAVSM) is developed to describe the vegetation scattering as crop changes over time through considering the probability density function of the crop orientation. The SAVSM achieved the best performance in fields of wheat, soybean and corn at various growth stages being in convert with the crop phenological development compared with current models that are mostly suitable for forest canopy. To remove the volume scattering component, in this thesis, an adaptive two-component model-based decomposition (ATCD) was developed, in which the surface scattering is a X-Bragg scattering, whereas the volume scattering is the SAVSM. The volumetric soil moisture derived from the ATCD is more consistent with the verifiable ground conditions compared with other model-based decomposition methods with its RMSE improved significantly decreasing from 19 [vol.%] to 7 [vol.%]. However, the estimation by the ATCD is biased when the measured soil moisture is greater than 30 [vol.%]. To overcome this issue, in this thesis, an integrated surface parameter inversion scheme (ISPIS) is proposed, in which a calibrated Integral Equation Model together with the SAVSM is employed. The derived soil moisture and surface roughness are more consistent with verifiable observations with the overall RMSE of 6.12 [vol.%] and 0.48, respectively

Advanced machine learning algorithms for Canadian wetland mapping using polarimetric synthetic aperture radar (PolSAR) and optical imagery

Wetlands are complex land cover ecosystems that represent a wide range of biophysical conditions. They are one of the most productive ecosystems and provide several important environmental functionalities. As such, wetland mapping and monitoring using cost- and time-efficient approaches are of great interest for sustainable management and resource assessment. In this regard, satellite remote sensing data are greatly beneficial, as they capture a synoptic and multi-temporal view of landscapes. The ability to extract useful information from satellite imagery greatly affects the accuracy and reliability of the final products. This is of particular concern for mapping complex land cover ecosystems, such as wetlands, where complex, heterogeneous, and fragmented landscape results in similar backscatter/spectral signatures of land cover classes in satellite images. Accordingly, the overarching purpose of this thesis is to contribute to existing methodologies of wetland classification by proposing and developing several new techniques based on advanced remote sensing tools and optical and Synthetic Aperture Radar (SAR) imagery. Specifically, the importance of employing an efficient speckle reduction method for polarimetric SAR (PolSAR) image processing is discussed and a new speckle reduction technique is proposed. Two novel techniques are also introduced for improving the accuracy of wetland classification. In particular, a new hierarchical classification algorithm using multi-frequency SAR data is proposed that discriminates wetland classes in three steps depending on their complexity and similarity. The experimental results reveal that the proposed method is advantageous for mapping complex land cover ecosystems compared to single stream classification approaches, which have been extensively used in the literature. Furthermore, a new feature weighting approach is proposed based on the statistical and physical characteristics of PolSAR data to improve the discrimination capability of input features prior to incorporating them into the classification scheme. This study also demonstrates the transferability of existing classification algorithms, which have been developed based on RADARSAT-2 imagery, to compact polarimetry SAR data that will be collected by the upcoming RADARSAT Constellation Mission (RCM). The capability of several well-known deep Convolutional Neural Network (CNN) architectures currently employed in computer vision is first introduced in this thesis for classification of wetland complexes using multispectral remote sensing data. Finally, this research results in the first provincial-scale wetland inventory maps of Newfoundland and Labrador using the Google Earth Engine (GEE) cloud computing resources and open access Earth Observation (EO) collected by the Copernicus Sentinel missions. Overall, the methodologies proposed in this thesis address fundamental limitations/challenges of wetland mapping using remote sensing data, which have been ignored in the literature. These challenges include the backscattering/spectrally similar signature of wetland classes, insufficient classification accuracy of wetland classes, and limitations of wetland mapping on large scales. In addition to the capabilities of the proposed methods for mapping wetland complexes, the use of these developed techniques for classifying other complex land cover types beyond wetlands, such as sea ice and crop ecosystems, offers a potential avenue for further research

Quantitative Estimation of Surface Soil Moisture in Agricultural Landscapes using Spaceborne Synthetic Aperture Radar Imaging at Different Frequencies and Polarizations

Soil moisture and its distribution in space and time plays an important role in the surface energy balance at the soil-atmosphere interface. It is a key variable influencing the partitioning of solar energy into latent and sensible heat flux as well as the partitioning of precipitation into runoff and percolation. Due to their large spatial variability, estimation of spatial patterns of soil moisture from field measurements is difficult and not feasible for large scale analyses. In the past decades, Synthetic Aperture Radar (SAR) remote sensing has proven its potential to quantitatively estimate near surface soil moisture at high spatial resolutions. Since the knowledge of the basic SAR concepts is important to understand the impact of different natural terrain features on the quantitative estimation of soil moisture and other surface parameters, the fundamental principles of synthetic aperture radar imaging are discussed. Also the two spaceborne SAR missions whose data was used in this study, the ENVISAT of the European Space Agency (ESA) and the ALOS of the Japanese Aerospace Exploration Agency (JAXA), are introduced. Subsequently, the two essential surface properties in the field of radar remote sensing, surface soil moisture and surface roughness are defined, and the established methods of their measurement are described. The in situ data used in this study, as well as the research area, the River Rur catchment, with the individual test sites where the data was collected between 2007 and 2010, are specified. On this basis, the important scattering theories in radar polarimetry are discussed and their application is demonstrated using novel polarimetric ALOS/PALSAR data. A critical review of different classical approaches to invert soil moisture from SAR imaging is provided. Five prevalent models have been chosen with the aim to provide an overview of the evolution of ideas and techniques in the field of soil moisture estimation from active microwave data. As the core of this work, a new semi-empirical model for the inversion of surface soil moisture from dual polarimetric L-band SAR data is introduced. This novel approach utilizes advanced polarimetric decomposition techniques to correct for the disturbing effects from surface roughness and vegetation on the soil moisture retrieval without the use of a priori knowledge. The land use specific algorithms for bare soil, grassland, sugar beet, and winter wheat allow quantitative estimations with accuracies in the order of 4 Vol.-%. Application of remotely sensed soil moisture patterns is demonstrated on the basis of mesoscale SAR data by investigating the variability of soil moisture patterns at different spatial scales ranging from field scale to catchment scale. The results show that the variability of surface soil moisture decreases with increasing wetness states at all scales. Finally, the conclusions from this dissertational research are summarized and future perspectives on how to extend the proposed model by means of improved ground based measurements and upcoming advances in sensor technology are discussed. The results obtained in this thesis lead to the conclusion that state-of-the-art spaceborne dual polarimetric L-band SAR systems are not only suitable to accurately retrieve surface soil moisture contents of bare as well as of vegetated agricultural fields and grassland, but for the first time also allow investigating within-field spatial heterogeneities from space

Polarimetric Synthetic Aperture Radar

This open access book focuses on the practical application of electromagnetic polarimetry principles in Earth remote sensing with an educational purpose. In the last decade, the operations from fully polarimetric synthetic aperture radar such as the Japanese ALOS/PalSAR, the Canadian Radarsat-2 and the German TerraSAR-X and their easy data access for scientific use have developed further the research and data applications at L,C and X band. As a consequence, the wider distribution of polarimetric data sets across the remote sensing community boosted activity and development in polarimetric SAR applications, also in view of future missions. Numerous experiments with real data from spaceborne platforms are shown, with the aim of giving an up-to-date and complete treatment of the unique benefits of fully polarimetric synthetic aperture radar data in five different domains: forest, agriculture, cryosphere, urban and oceans

Spatial Modeling of Compact Polarimetric Synthetic Aperture Radar Imagery

The RADARSAT Constellation Mission (RCM) utilizes compact polarimetric (CP) mode to provide data with varying resolutions, supporting a wide range of applications including oil spill detection, sea ice mapping, and land cover analysis. However, the complexity and variability of CP data, influenced by factors such as weather conditions and satellite infrastructure, introduce signature ambiguity. This ambiguity poses challenges in accurate object classification, reducing discriminability and increasing uncertainty. To address these challenges, this thesis introduces tailored spatial models in CP SAR imagery through the utilization of machine learning techniques. Firstly, to enhance oil spill monitoring, a novel conditional random field (CRF) is introduced. The CRF model leverages the statistical properties of CP SAR data and exploits similarities in labels and features among neighboring pixels to effectively model spatial interactions. By mitigating the impact of speckle noise and accurately distinguishing oil spill candidates from oil-free water, the CRF model achieves successful results even in scenarios where the availability of labeled samples is limited. This highlights the capability of CRF in handling situations with a scarcity of training data. Secondly, to improve the accuracy of sea ice mapping, a region-based automated classification methodology is developed. This methodology incorporates learned features, spatial context, and statistical properties from various SAR modes, resulting in enhanced classification accuracy and improved algorithmic efficiency. Thirdly, the presence of a high degree of heterogeneity in target distribution presents an additional challenge in land cover mapping tasks, further compounded by signature ambiguity. To address this, a novel transformer model is proposed. The transformer model incorporates both fine- and coarse-grained spatial dependencies between pixels and leverages different levels of features to enhance the accuracy of land cover type detection. The proposed approaches have undergone extensive experimentation in various remote sensing tasks, validating their effectiveness. By introducing tailored spatial models and innovative algorithms, this thesis successfully addresses the inherent complexity and variability of CP data, thereby ensuring the accuracy and reliability of diverse applications in the field of remote sensing

Study of the speckle noise effects over the eigen decomposition of polarimetric SAR data: a review

This paper is focused on considering the effects of speckle noise on the eigen decomposition of the co- herency matrix. Based on a perturbation analysis of the matrix, it is possible to obtain an analytical expression for the mean value of the eigenvalues and the eigenvectors, as well as for the Entropy, the Anisotroopy and the dif- ferent a angles. The analytical expressions are compared against simulated polarimetric SAR data, demonstrating the correctness of the different expressions.Peer ReviewedPostprint (published version

Polarimetric Synthetic Aperture Radar, Principles and Application

Demonstrates the benefits of the usage of fully polarimetric synthetic aperture radar data in applications of Earth remote sensing, with educational and development purposes. Includes numerous up-to-date examples with real data from spaceborne platforms and possibility to use a software to support lecture practicals. Reviews theoretical principles in an intuitive way for each application topic. Covers in depth five application domains (forests, agriculture, cryosphere, urban, and oceans), with reference also to hazard monitorin