13,811 research outputs found
Inertial Coupling Method for particles in an incompressible fluctuating fluid
We develop an inertial coupling method for modeling the dynamics of
point-like 'blob' particles immersed in an incompressible fluid, generalizing
previous work for compressible fluids. The coupling consistently includes
excess (positive or negative) inertia of the particles relative to the
displaced fluid, and accounts for thermal fluctuations in the fluid momentum
equation. The coupling between the fluid and the blob is based on a no-slip
constraint equating the particle velocity with the local average of the fluid
velocity, and conserves momentum and energy. We demonstrate that the
formulation obeys a fluctuation-dissipation balance, owing to the
non-dissipative nature of the no-slip coupling. We develop a spatio-temporal
discretization that preserves, as best as possible, these properties of the
continuum formulation. In the spatial discretization, the local averaging and
spreading operations are accomplished using compact kernels commonly used in
immersed boundary methods. We find that the special properties of these kernels
make the discrete blob a particle with surprisingly physically-consistent
volume, mass, and hydrodynamic properties. We develop a second-order
semi-implicit temporal integrator that maintains discrete
fluctuation-dissipation balance, and is not limited in stability by viscosity.
Furthermore, the temporal scheme requires only constant-coefficient Poisson and
Helmholtz linear solvers, enabling a very efficient and simple FFT-based
implementation on GPUs. We numerically investigate the performance of the
method on several standard test problems...Comment: Contains a number of corrections and an additional Figure 7 (and
associated discussion) relative to published versio
An efficient parallel immersed boundary algorithm using a pseudo-compressible fluid solver
We propose an efficient algorithm for the immersed boundary method on
distributed-memory architectures, with the computational complexity of a
completely explicit method and excellent parallel scaling. The algorithm
utilizes the pseudo-compressibility method recently proposed by Guermond and
Minev [Comptes Rendus Mathematique, 348:581-585, 2010] that uses a directional
splitting strategy to discretize the incompressible Navier-Stokes equations,
thereby reducing the linear systems to a series of one-dimensional tridiagonal
systems. We perform numerical simulations of several fluid-structure
interaction problems in two and three dimensions and study the accuracy and
convergence rates of the proposed algorithm. For these problems, we compare the
proposed algorithm against other second-order projection-based fluid solvers.
Lastly, the strong and weak scaling properties of the proposed algorithm are
investigated
A fast immersed boundary method for external incompressible viscous flows using lattice Green's functions
A new parallel, computationally efficient immersed boundary method for
solving three-dimensional, viscous, incompressible flows on unbounded domains
is presented. Immersed surfaces with prescribed motions are generated using the
interpolation and regularization operators obtained from the discrete delta
function approach of the original (Peskin's) immersed boundary method. Unlike
Peskin's method, boundary forces are regarded as Lagrange multipliers that are
used to satisfy the no-slip condition. The incompressible Navier-Stokes
equations are discretized on an unbounded staggered Cartesian grid and are
solved in a finite number of operations using lattice Green's function
techniques. These techniques are used to automatically enforce the natural
free-space boundary conditions and to implement a novel block-wise adaptive
grid that significantly reduces the run-time cost of solutions by limiting
operations to grid cells in the immediate vicinity and near-wake region of the
immersed surface. These techniques also enable the construction of practical
discrete viscous integrating factors that are used in combination with
specialized half-explicit Runge-Kutta schemes to accurately and efficiently
solve the differential algebraic equations describing the discrete momentum
equation, incompressibility constraint, and no-slip constraint. Linear systems
of equations resulting from the time integration scheme are efficiently solved
using an approximation-free nested projection technique. The algebraic
properties of the discrete operators are used to reduce projection steps to
simple discrete elliptic problems, e.g. discrete Poisson problems, that are
compatible with recent parallel fast multipole methods for difference
equations. Numerical experiments on low-aspect-ratio flat plates and spheres at
Reynolds numbers up to 3,700 are used to verify the accuracy and physical
fidelity of the formulation.Comment: 32 pages, 9 figures; preprint submitted to Journal of Computational
Physic
Hydrodynamics of Suspensions of Passive and Active Rigid Particles: A Rigid Multiblob Approach
We develop a rigid multiblob method for numerically solving the mobility
problem for suspensions of passive and active rigid particles of complex shape
in Stokes flow in unconfined, partially confined, and fully confined
geometries. As in a number of existing methods, we discretize rigid bodies
using a collection of minimally-resolved spherical blobs constrained to move as
a rigid body, to arrive at a potentially large linear system of equations for
the unknown Lagrange multipliers and rigid-body motions. Here we develop a
block-diagonal preconditioner for this linear system and show that a standard
Krylov solver converges in a modest number of iterations that is essentially
independent of the number of particles. For unbounded suspensions and
suspensions sedimented against a single no-slip boundary, we rely on existing
analytical expressions for the Rotne-Prager tensor combined with a fast
multipole method or a direct summation on a Graphical Processing Unit to obtain
an simple yet efficient and scalable implementation. For fully confined
domains, such as periodic suspensions or suspensions confined in slit and
square channels, we extend a recently-developed rigid-body immersed boundary
method to suspensions of freely-moving passive or active rigid particles at
zero Reynolds number. We demonstrate that the iterative solver for the coupled
fluid and rigid body equations converges in a bounded number of iterations
regardless of the system size. We optimize a number of parameters in the
iterative solvers and apply our method to a variety of benchmark problems to
carefully assess the accuracy of the rigid multiblob approach as a function of
the resolution. We also model the dynamics of colloidal particles studied in
recent experiments, such as passive boomerangs in a slit channel, as well as a
pair of non-Brownian active nanorods sedimented against a wall.Comment: Under revision in CAMCOS, Nov 201
A comparative study of immersed-boundary interpolation methods for a flow around a stationary cylinder at low Reynolds number
The accuracy and computational efficiency of various interpolation methods for the implementation of non grid-confirming boundaries is assessed. The aim of the research is to select an interpolation method that is both efficient and sufficiently accurate to be used in the simulation of vortex induced vibration of the flow around a deformable cylinder. Results are presented of an immersed boundary implementation in which the velocities near nonconfirming boundaries were interpolated in the normal direction to the walls. The flow field is solved on a Cartesian grid using a finite volume method with a staggered variable arrangement. The Strouhal number and Drag coefficient for various cases are reported. The results show a good agreement with the literature. Also, the drag coefficient and Strouhal number results for five different interpolation methods were compared it was shown that for a stationary cylinder at low Reynolds number, the interpolation method could affect the drag coefficient by a maximum 2% and the Strouhal number by maximum of 3%. In addition, the bi-liner interpolation method took about 2% more computational time per vortex shedding cycle in companion to the other methods
cuIBM -- A GPU-accelerated Immersed Boundary Method
A projection-based immersed boundary method is dominated by sparse linear
algebra routines. Using the open-source Cusp library, we observe a speedup
(with respect to a single CPU core) which reflects the constraints of a
bandwidth-dominated problem on the GPU. Nevertheless, GPUs offer the capacity
to solve large problems on commodity hardware. This work includes validation
and a convergence study of the GPU-accelerated IBM, and various optimizations.Comment: Extended paper post-conference, presented at the 23rd International
Conference on Parallel Computational Fluid Dynamics (http://www.parcfd.org),
ParCFD 2011, Barcelona (unpublished
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