Unsupervised clustering of IoT signals through feature extraction and self organizing maps

This thesis scope is to build a clustering model to inspect the structural properties of a dataset composed of IoT signals and to classify these through unsupervised clustering algorithms. To this end, a feature-based representation of the signals is used. Different feature selection algorithms are then used to obtain reduced feature spaces, so as to decrease the computational cost and the memory demand. Thus, the IoT signals are clustered using Self-Organizing Maps (SOM) and then evaluatedope

Partition Decoupling for Multi-gene Analysis of Gene Expression Profiling Data

We present the extention and application of a new unsupervised statistical learning technique--the Partition Decoupling Method--to gene expression data. Because it has the ability to reveal non-linear and non-convex geometries present in the data, the PDM is an improvement over typical gene expression analysis algorithms, permitting a multi-gene analysis that can reveal phenotypic differences even when the individual genes do not exhibit differential expression. Here, we apply the PDM to publicly-available gene expression data sets, and demonstrate that we are able to identify cell types and treatments with higher accuracy than is obtained through other approaches. By applying it in a pathway-by-pathway fashion, we demonstrate how the PDM may be used to find sets of mechanistically-related genes that discriminate phenotypes.Comment: Revise

Data Management and Mining in Astrophysical Databases

We analyse the issues involved in the management and mining of astrophysical data. The traditional approach to data management in the astrophysical field is not able to keep up with the increasing size of the data gathered by modern detectors. An essential role in the astrophysical research will be assumed by automatic tools for information extraction from large datasets, i.e. data mining techniques, such as clustering and classification algorithms. This asks for an approach to data management based on data warehousing, emphasizing the efficiency and simplicity of data access; efficiency is obtained using multidimensional access methods and simplicity is achieved by properly handling metadata. Clustering and classification techniques, on large datasets, pose additional requirements: computational and memory scalability with respect to the data size, interpretability and objectivity of clustering or classification results. In this study we address some possible solutions.Comment: 10 pages, Late

DRBM-ClustNet: A Deep Restricted Boltzmann-Kohonen Architecture for Data Clustering

A Bayesian Deep Restricted Boltzmann-Kohonen architecture for data clustering termed as DRBM-ClustNet is proposed. This core-clustering engine consists of a Deep Restricted Boltzmann Machine (DRBM) for processing unlabeled data by creating new features that are uncorrelated and have large variance with each other. Next, the number of clusters are predicted using the Bayesian Information Criterion (BIC), followed by a Kohonen Network-based clustering layer. The processing of unlabeled data is done in three stages for efficient clustering of the non-linearly separable datasets. In the first stage, DRBM performs non-linear feature extraction by capturing the highly complex data representation by projecting the feature vectors of $d$ dimensions into $n$ dimensions. Most clustering algorithms require the number of clusters to be decided a priori, hence here to automate the number of clusters in the second stage we use BIC. In the third stage, the number of clusters derived from BIC forms the input for the Kohonen network, which performs clustering of the feature-extracted data obtained from the DRBM. This method overcomes the general disadvantages of clustering algorithms like the prior specification of the number of clusters, convergence to local optima and poor clustering accuracy on non-linear datasets. In this research we use two synthetic datasets, fifteen benchmark datasets from the UCI Machine Learning repository, and four image datasets to analyze the DRBM-ClustNet. The proposed framework is evaluated based on clustering accuracy and ranked against other state-of-the-art clustering methods. The obtained results demonstrate that the DRBM-ClustNet outperforms state-of-the-art clustering algorithms.Comment: 14 pages, 7 figure

Medical imaging analysis with artificial neural networks

Given that neural networks have been widely reported in the research community of medical imaging, we provide a focused literature survey on recent neural network developments in computer-aided diagnosis, medical image segmentation and edge detection towards visual content analysis, and medical image registration for its pre-processing and post-processing, with the aims of increasing awareness of how neural networks can be applied to these areas and to provide a foundation for further research and practical development. Representative techniques and algorithms are explained in detail to provide inspiring examples illustrating: (i) how a known neural network with fixed structure and training procedure could be applied to resolve a medical imaging problem; (ii) how medical images could be analysed, processed, and characterised by neural networks; and (iii) how neural networks could be expanded further to resolve problems relevant to medical imaging. In the concluding section, a highlight of comparisons among many neural network applications is included to provide a global view on computational intelligence with neural networks in medical imaging

ANTIDS: Self-Organized Ant-based Clustering Model for Intrusion Detection System

Security of computers and the networks that connect them is increasingly becoming of great significance. Computer security is defined as the protection of computing systems against threats to confidentiality, integrity, and availability. There are two types of intruders: the external intruders who are unauthorized users of the machines they attack, and internal intruders, who have permission to access the system with some restrictions. Due to the fact that it is more and more improbable to a system administrator to recognize and manually intervene to stop an attack, there is an increasing recognition that ID systems should have a lot to earn on following its basic principles on the behavior of complex natural systems, namely in what refers to self-organization, allowing for a real distributed and collective perception of this phenomena. With that aim in mind, the present work presents a self-organized ant colony based intrusion detection system (ANTIDS) to detect intrusions in a network infrastructure. The performance is compared among conventional soft computing paradigms like Decision Trees, Support Vector Machines and Linear Genetic Programming to model fast, online and efficient intrusion detection systems.Comment: 13 pages, 3 figures, Swarm Intelligence and Patterns (SIP)- special track at WSTST 2005, Muroran, JAPA