Coreference resolution in clinical discharge summaries, progress notes, surgical and pathology reports: a unified lexical approach

We developed a lexical rule-based system that uses a unified approach to resolving coreference across a wide variety of clinical records comprising discharge summaries, progress notes, pathology, radiology and surgical reports from two corpora (Ontology Development and Information Extraction (ODIE) and i2b2/VA) provided for the fifth i2b2/VA shared task. Taking the unweighted mean between 4 coreference metrics, validation of the system against the i2b2/VA corpus attained an overall F-score of 87.7% across all mention classes, with a maximum of 93.1% for coreference of persons, and a minimum of 77.2% for coreference of tests. For the ODIE corpus the overall F-score across all mention classes was 79.4%, with a maximum of 82.0% for coreference of persons and a minimum of 13.1% for coreference of diagnostic reagents. For the ODIE corpus our results are comparable to the mean reported inter-annotator agreement with the gold standard. We discuss the four categories of errors we identified, and how these might be addressed. The system uses a number of reusable modules and techniques that may be of benefit to the research community

Statistical Parsing by Machine Learning from a Classical Arabic Treebank

Research into statistical parsing for English has enjoyed over a decade of successful results. However, adapting these models to other languages has met with difficulties. Previous comparative work has shown that Modern Arabic is one of the most difficult languages to parse due to rich morphology and free word order. Classical Arabic is the ancient form of Arabic, and is understudied in computational linguistics, relative to its worldwide reach as the language of the Quran. The thesis is based on seven publications that make significant contributions to knowledge relating to annotating and parsing Classical Arabic. Classical Arabic has been studied in depth by grammarians for over a thousand years using a traditional grammar known as i’rāb (إعغاة ). Using this grammar to develop a representation for parsing is challenging, as it describes syntax using a hybrid of phrase-structure and dependency relations. This work aims to advance the state-of-the-art for hybrid parsing by introducing a formal representation for annotation and a resource for machine learning. The main contributions are the first treebank for Classical Arabic and the first statistical dependency-based parser in any language for ellipsis, dropped pronouns and hybrid representations. A central argument of this thesis is that using a hybrid representation closely aligned to traditional grammar leads to improved parsing for Arabic. To test this hypothesis, two approaches are compared. As a reference, a pure dependency parser is adapted using graph transformations, resulting in an 87.47% F1-score. This is compared to an integrated parsing model with an F1-score of 89.03%, demonstrating that joint dependency-constituency parsing is better suited to Classical Arabic. The Quran was chosen for annotation as a large body of work exists providing detailed syntactic analysis. Volunteer crowdsourcing is used for annotation in combination with expert supervision. A practical result of the annotation effort is the corpus website: http://corpus.quran.com, an educational resource with over two million users per year

Overview of the SPMRL 2013 shared task: cross-framework evaluation of parsing morphologically rich languages

This paper reports on the first shared task on statistical parsing of morphologically rich languages (MRLs). The task features data sets from nine languages, each available both in constituency and dependency annotation. We report on the preparation of the data sets, on the proposed parsing scenarios, and on the evaluation metrics for parsing MRLs given different representation types. We present and analyze parsing results obtained by the task participants, and then provide an analysis and comparison of the parsers across languages and frameworks, reported for gold input as well as more realistic parsing scenarios

Overview of the SPMRL 2013 Shared Task: A Cross-Framework Evaluation of Parsing Morphologically Rich Languages

International audienceThis paper reports on the first shared task on statistical parsing of morphologically rich lan- guages (MRLs). The task features data sets from nine languages, each available both in constituency and dependency annotation. We report on the preparation of the data sets, on the proposed parsing scenarios, and on the eval- uation metrics for parsing MRLs given dif- ferent representation types. We present and analyze parsing results obtained by the task participants, and then provide an analysis and comparison of the parsers across languages and frameworks, reported for gold input as well as more realistic parsing scenarios

Natural Language Processing Resources for Finnish. Corpus Development in the General and Clinical Domains

Siirretty Doriast