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Benchmark of murine T-cell epitope predictions based on comparative models.

By Dina Schneidman-Duhovny (10167), Natalia Khuri (1992196), Guang Qiang Dong (5937947), Michael B. Winter (2197576), Eric Shifrut (5937950), Nir Friedman (42607), Charles S. Craik (174573), Kathleen P. Pratt (411067), Pedro Paz (5937953), Fred Aswad (5937956) and Andrej Sali (17326)

Abstract

<p>Benchmark of murine T-cell epitope predictions based on comparative models.</p

Topics: Biochemistry, Biotechnology, Immunology, Infectious Diseases, Biological Sciences not elsewhere classified, Chemical Sciences not elsewhere classified, Information Systems not elsewhere classified, HLA-DR 1-restricted factor VIII epitope, single-stage epitope prediction algorithms, MHC class II, 24 benchmark cases, TCR recognition, epitope predictions, APC, 12- mer peptide, input protein antigen sequence, method, 20 peptide-MHCII-TCR crystal structures, bind HLA-DR 1, antigen cleavage sites, factor VIII replacement therapy, ternary peptide-MHCII-TCR complexes, antigen cleavage, T-cell epitopes, MHCII presentation, factor VIII-specific TCR sequences, TCR sequences, CD 4 T-cell epitopes, top-scoring factor VIII peptides, peptide-MHCII complexes
Year: 2018
DOI identifier: 10.1371/journal.pone.0206654.t002
OAI identifier: oai:figshare.com:article/7303139
Provided by: FigShare
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