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Ontology based annotation of contextualized vital signs

Representing the kinetic state of a patient (posture, motion, and activity) during vital sign measurement is an important part of continuous monitoring applications, especially remote monitoring applications. In contextualized vital sign representation, the measurement result is presented in conjunction with salient measurement context metadata. We present an automated annotation system for vital sign measurements that uses ontologies from the Open Biomedical Ontology Foundry (OBO Foundry) to represent the patient’s kinetic state at the time of measurement. The annotation system is applied to data generated by a wearable personal status monitoring (PSM) device. We demonstrate how annotated PSM data can be queried for contextualized vital signs as well as sensor algorithm configuration parameters

TGF-beta signaling proteins and the Protein Ontology

The Protein Ontology (PRO) is designed as a formal and principled Open Biomedical Ontologies (OBO) Foundry ontology for proteins. The components of PRO extend from a classification of proteins on the basis of evolutionary relationships at the homeomorphic level to the representation of the multiple protein forms of a gene, including those resulting from alternative splicing, cleavage and/or posttranslational modifications. Focusing specifically on the TGF-beta signaling proteins, we describe the building, curation, usage and dissemination of PRO. PRO provides a framework for the formal representation of protein classes and protein forms in the OBO Foundry. It is designed to enable data retrieval and integration and machine reasoning at the molecular level of proteins, thereby facilitating cross-species comparisons, pathway analysis, disease modeling and the generation of new hypotheses

GEOPOL®. The innovated environment friendly inorganic binder system

This paper deals with the complete technology of inorganic geopolymer binder system GEOPOL® which is a result of long term research and development. The objective of this paper is to provide a theoretical and practical overview of the GEOPOL® binder system and introduce possible ways of moulds and cores production in foundries. GEOPOL® is a unique inorganic binder system, which is needed and welcomed in terms of the environment, the work environment, and the sustainable resources. The GEOPOL® technology is currently used in the foundries for three basic production processes/technologies: (1) for self-hardening moulding mixtures, (2) sand mixtures hardened by gaseous carbon dioxide and (3) the hot box technology with hot air hardening. The GEOPOL® technology not only solves the binder system and the ways of hardening, but also deals with the entire foundry production process. Low emissions produced during mixing of sand, moulding, handling, and pouring bring a relatively significant improvement of work conditions in foundries (no VOCs). A high percentage of the reclaim sand can be used again for the preparation of the moulding mixture.Web of Science19111610

Evolution of the Sequence Ontology terms and relationships

The Sequence Ontology is undergoing reform to meet the standards of the OBO Foundry. Here we report some of the incremental changes and improvements made to SO. We also propose new relationships to better define the mereological, spatial and temporal aspects of biological sequence

Corrosion and wear in moulding boxes

We assess the potential causes of damage to mould box ends and find that both HOT corrosion, due to burning of emitted volatiles, and COLD corrosion, due to the presence of high humidity (and possibly high chloride ion concentration), are likely to contribute to the damage. We suggest strategies to minimise the damage, including venting of the volatiles, ventilation of the pallet grooves during cooling and minimisation of brushing effects during cleaning. Some calculations are described in an attempt to quantify the various effects discussed, but we are unable to accurately estimate their significance

Trojans in Early Design Steps—An Emerging Threat

Hardware Trojans inserted by malicious foundries during integrated circuit manufacturing have received substantial attention in recent years. In this paper, we focus on a different type of hardware Trojan threats: attacks in the early steps of design process. We show that third-party intellectual property cores and CAD tools constitute realistic attack surfaces and that even system specification can be targeted by adversaries. We discuss the devastating damage potential of such attacks, the applicable countermeasures against them and their deficiencies