Statistics of SNPv numbers of different types.

<p>Statistics of SNPv numbers of different types.</p

Numbers of methylation reads in SNPv rich region.

<p>Numbers of methylation reads in SNPv rich region.</p

GO analysis of genes containing chip-SNP, SS-SNPv and ST-SNPv.

<p>GO analysis of genes containing chip-SNP, SS-SNPv and ST-SNPv.</p

The possible relation of ROS, DNA methylation, SNPv and SNPr.

<p>The possible relation of ROS, DNA methylation, SNPv and SNPr.</p

GO analysis of genes neighboring SNPr rich regions.

<p>GO analysis of genes neighboring SNPr rich regions.</p

Mining and Analysis of SNP in Response to Salinity Stress in Upland Cotton (<i>Gossypium hirsutum</i> L.) - Fig 5

<p>Locations (a) and distribution (b) of SNPr in different chromosomes. The boxes in Fig 5A are the rich region of SNPr.</p

Salt tolerance index and numbers of SNPv in different varieties.

<p>Salt tolerance index and numbers of SNPv in different varieties.</p

Distribution on the chromosomes of SNPv of eight varieties and chip SNP.

<p>1~4: the salt sensitive varieties: Hengmian3, GK50, Xinyan96-48, ZhongS9612; 5~8: the salt tolerant varieties: CRI35, Zhong9807, CRI 44, Kanghuangwei164; 9: Illumina Cotton SNP 70K Chip.</p

Morphological changes of seedlings after treatments and identification of long noncoding RNAs (lncRNAs).

<p>(a) Morphological changes of cotton seedlings after drought and re-watering treatments at trefoil stage. (b) The classification of transcripts by RNA-seq. (c) The Pipeline for the identification of lncRNAs in <i>Gossypium hirsutum</i> L.</p

Additional file 4: Figure S4. of Single-base resolution methylomes of upland cotton (Gossypium hirsutum L.) reveal epigenome modifications in response to drought stress

DMRs length analysis in each chromosome between drought and control sample (PNG 107 kb