8 research outputs found
Gas-Phase Reactions of Microsolvated Fluoride Ions: An Investigation of Different Solvents
The gas-phase reactions of F<sup>–</sup>(DMSO),
F<sup>–</sup>(CH<sub>3</sub>CN), and F<sup>–</sup>(C<sub>6</sub>H<sub>6</sub>) with <i>t</i>-butyl halides were
investigated. Reaction
rate constants, kinetic isotope effects, and product ion branching
ratios were measured using the flowing afterglow selected ion flow
tube technique (FA-SIFT). Additionally, the structure of F<sup>–</sup>(DMSO) was investigated both computationally and experimentally,
and two stable isomers were identified. The reactions generally proceed
by elimination mechanisms; however, the reaction of F<sup>–</sup>(C<sub>6</sub>H<sub>6</sub>) with <i>t</i>-butyl chloride
occurs by a switching mechanism. These reactions are compared to previous
studies of microsolvated reactions of <i>t</i>-butyl halides
where the solvent molecules were polar, protic molecules
Gas-Phase Reactions of CF<sup>+</sup> with Molecules of Interstellar Relevance
We have studied the gas-phase reactions
of CF<sup>+</sup> with
24 neutral species. Reaction rate constants and product branching
fractions are measured at 298 K using a flowing afterglow-selected
ion flow tube. Experimental work is supported by computational chemistry
calculations to provide insight into the reactivity of classes of
neutral molecules. Reactions of CF<sup>+</sup> with small triatomic
species and oxygen-containing organic molecules produce the stable
molecule CO. The product branching fractions are discussed, and the
potential energy surfaces for a few representative reactions are examined.
CF<sup>+</sup> is highly reactive with complex molecules and will
likely be destroyed in dense environments in the interstellar medium.
However, the lack of reactivity with small diatomic molecules will
likely enable its survival in diffuse regions
Deprotonated Purine Dissociation: Experiments, Computations, and Astrobiological Implications
A central focus of astrobiology is
the determination of abiotic
formation routes to important biomolecules. The dissociation mechanisms
of these molecules lend valuable insights into their synthesis pathways.
Because of the detection of organic anions in the interstellar medium
(ISM), it is imperative to study their role in these syntheses. This
work aims to experimentally and computationally examine deprotonated
adenine and guanine dissociation in an effort to illuminate potential
anionic precursors to purine formation. Collision-induced dissociation
(CID) products and their branching fractions are experimentally measured
using an ion trap mass spectrometer. Deprotonated guanine dissociates
primarily by deammoniation (97%) with minor losses of carbodiimide
(HNCNH) and/or cyanamide (NH<sub>2</sub>CN), and isocyanic acid (HNCO).
Deprotonated adenine fragments by loss of hydrogen cyanide and/or
isocyanide (HCN/HNC; 90%) and carbodiimide (HNCNH) and/or cyanamide
(NH<sub>2</sub>CN; 10%). Tandem mass spectrometry (MS<sup><i>n</i></sup>) experiments reveal that deprotonated guanine fragments
lose additional HCN and CO, while deprotonated adenine fragments successively
lose HNC and HCN. Every neutral fragment observed in this study has
been detected in the ISM, highlighting the potential for nucleobases
such as these to form in such environments. Lastly, the acidity of
abundant fragment ions is experimentally bracketed. Theoretical calculations
at the B3LYP/6-311++GÂ(d,p) level of theory are performed to delineate
the mechanisms of dissociation and analyze the energies of reactants,
intermediates, transition states, and products of these CID processes
Reactions of Sulfur- and Oxygen-Containing Anions with Hydrogen Atoms: A Comparative Study
Reactions
of hydrogen atoms with small sulfur-containing anions,
SCN<sup>–</sup>, CH<sub>3</sub>COS<sup>–</sup>, C<sub>6</sub>H<sub>5</sub>COS<sup>–</sup>, <sup>–</sup>SCH<sub>2</sub>COOH, C<sub>6</sub>H<sub>5</sub>S<sup>–</sup>, 2-HOOCC<sub>6</sub>H<sub>4</sub>S<sup>–</sup>, and related oxygen-containing
anions, OCN<sup>–</sup>, CH<sub>3</sub>COO<sup>–</sup>, C<sub>6</sub>H<sub>5</sub>COO<sup>–</sup>, HOCH<sub>2</sub>COO<sup>–</sup>, C<sub>6</sub>H<sub>5</sub>O<sup>–</sup>, 2-HOOCC<sub>6</sub>H<sub>4</sub>O<sup>–</sup>, have been
studied both experimentally and computationally. The experimental
results show that associative electron detachment (AED) is the only
channel for the reactions. The rate constants for reactions between
sulfur-containing anions and H atoms are generally higher than for
the related oxygen-containing anions with the exception of the reaction
of SCN<sup>–</sup>. The generally higher reactivity of the
sulfur anions contrasts with previous results where AED reactivity
was found to correlate with reaction exothermicity. Density functional
theory calculations indicate that the reaction enthalpies, the characteristics
of the reaction potential energy surfaces, and other structural and
electronic factors can influence the reaction rate constants. This
study indicates that organic sulfur anions can be more reactive than
related oxygen anions in the interstellar medium where hydrogen atoms
are abundant
Investigating the α‑Effect in Gas-Phase S<sub>N</sub>2 Reactions of Microsolvated Anions
The α-effectenhanced
reactivity of nucleophiles with
a lone-pair adjacent to the attacking centerî—¸was recently demonstrated
for gas-phase S<sub>N</sub>2 reactions of HOO<sup>–</sup>,
supporting an intrinsic component of the α-effect. In the present
work we explore the gas-phase reactivity of microsolvated nucleophiles
in order to investigate in detail how the α-effect is influenced
by solvent. We compare the gas-phase reactivity of the microsolvated
α-nucleophile HOO<sup>–</sup>(H<sub>2</sub>O) to that
of microsolvated normal alkoxy nucleophiles, RO<sup>–</sup>(H<sub>2</sub>O), in reaction with CH<sub>3</sub>Cl using a flowing
afterglow-selected ion flow tube instrument. The results reveal enhanced
reactivity of HOO<sup>–</sup>(H<sub>2</sub>O) and clearly demonstrate
the presence of an α-effect for the microsolvated α-nucleophile.
The association of the nucleophile with a single water molecule results
in a larger Brønsted β<sub>nuc</sub> value than is the
case for the unsolvated nucleophiles. Accordingly, the reactions of
the microsolvated nucleophiles proceed through later transition states
in which bond formation has progressed further. Calculations show
a significant difference in solvent interaction for HOO<sup>–</sup> relative to the normal nucleophiles at the transition states, indicating
that differential solvation may well contribute to the α-effect.
The reactions of the microsolvated anions with CH<sub>3</sub>Cl can
lead to formation of either the bare Cl<sup>–</sup> anion or
the Cl<sup>–</sup>(H<sub>2</sub>O) cluster. The product distributions
show preferential formation of the Cl<sup>–</sup> anion even
though the formation of Cl<sup>–</sup>(H<sub>2</sub>O) would
be favored thermodynamically. Although the structure of the HOO<sup>–</sup>(H<sub>2</sub>O) cluster resembles HO<sup>–</sup>(HOOH), we demonstrate that HOO<sup>–</sup> is the active
nucleophile when the cluster reacts
Experimental and Theoretical Studies of the Reactivity and Thermochemistry of Dicyanamide: N(CN)<sub>2</sub><sup>–</sup>
Dicyanamide [NÂ(CN)<sub>2</sub><sup>–</sup>] is a common
anionic component of ionic liquids, several of which have shown hypergolic
reactivity upon mixing with white-fuming nitric acid. In this study,
we explore the thermochemistry of dicyanamide and its reactivity with
nitric acid and other molecules to gain insight into the initial stages
of the hypergolic phenomenon. We have developed and utilized an electrospray
ion source for our selected ion flow tube (SIFT) to generate the dicyanamide
anion. We have explored the general reactivity of this ion with several
neutral molecules and atoms. Dicyanamide does not show reactivity
with O<sub>2</sub>, H<sub>2</sub>SO<sub>4</sub>, H<sub>2</sub>O<sub>2</sub>, DBr, HCl, NH<sub>3</sub>, N<sub>2</sub>O, SO<sub>2</sub>, COS, CO<sub>2</sub>, CH<sub>3</sub>OH, H<sub>2</sub>O, CH<sub>4</sub>, N<sub>2</sub>, CF<sub>4</sub>, or SF<sub>6</sub> (<i>k</i> < 1 × 10<sup>–12</sup> cm<sup>3</sup>/s); moreover,
dicyanamide does not react with N atom, O atom, or electronically
excited molecular oxygen (<i>k</i> < 5 × 10<sup>–12</sup> cm<sup>3</sup>/s), and our previous studies showed
no reactivity with H atom. However, at 0.45 Torr helium, we observe
the adduct of dicyanamide with nitric acid with an effective bimolecular
rate constant of 2.7 × 10<sup>–10</sup> cm<sup>3</sup>/s. Intrinsically, dicyanamide is a very stable anion in the gas
phase, as illustrated by its lack of reactivity, high electron-binding
energy, and low proton affinity. The lack of reactivity of dicyanamide
with H<sub>2</sub>SO<sub>4</sub> gives an upper limit for the gas-phase
deprotonation enthalpy of the parent compound (HNCNCN; <310 ±
3 kcal/mol). This limit is in agreement with theoretical calculations
at the MP2/6-311++GÂ(d,p) level of theory, finding that Δ<i>H</i><sub>298 K</sub>(HNCNCN) = 308.5 kcal/mol. Dicyanamide
has two different proton acceptor sites. Experimental and computational
results indicate that it is lower in energy to protonate the terminal
nitrile nitrogen than the central nitrogen. Although proton transfer
to dicyanamide was not observed for any of the acidic molecules investigated
here, the calculations on dicyanamide with one to three nitric acid
molecules reveal that higher-order solvation can favor exothermic
proton transfer. Furthermore, the formation of 1,5-dinitrobiuret,
proposed to be the key intermediate during the hypergolic ignition
of dicyanamide ionic liquids with nitric acid, is investigated by
calculation of the reaction coordinate. Our results suggest that solvation
dynamics of dicyanamide with nitric acid play an important role in
hypergolic ignition and the interactions at the droplet/condensed-phase
surface between the two hypergolic liquids are very important. Moreover,
dicyanamide exists in the atmosphere of Saturn’s moon, Titan;
the intrinsic stability of dicyanamide strongly suggests that it may
exist in molecular clouds of the interstellar medium, especially in
regions where other stable carbon–nitrogen anions have been
detected
Reactions of Azine Anions with Nitrogen and Oxygen Atoms: Implications for Titan’s Upper Atmosphere and Interstellar Chemistry
Azines are important in many extraterrestrial
environments, from
the atmosphere of Titan to the interstellar medium. They have been
implicated as possible carriers of the diffuse interstellar bands
in astronomy, indicating their persistence in interstellar space.
Most importantly, they constitute the basic building blocks of DNA
and RNA, so their chemical reactivity in these environments has significant
astrobiological implications. In addition, N and O atoms are widely
observed in the ISM and in the ionospheres of planets and moons. However,
the chemical reactions of molecular anions with abundant interstellar
and atmospheric atomic species are largely unexplored. In this paper,
gas-phase reactions of deprotonated anions of benzene, pyridine, pyridazine,
pyrimidine, pyrazine, and s-triazine with N and O atoms are studied
both experimentally and computationally. In all cases, the major reaction
channel is associative electron detachment; these reactions are particularly
important since they control the balance between negative ions and
free electron densities. The reactions of the azine anions with N
atoms exhibit larger rate constants than reactions of corresponding
chain anions. The reactions of azine anions with O atoms are even
more rapid, with complex product patterns for different reactants.
The mechanisms are studied theoretically by employing density functional
theory; spin conversion is found to be important in determining some
product distributions. The rich gas-phase chemistry observed in this
work provides a better understanding of ion-atom reactions and their
contributions to ionospheric chemistry as well as the chemical processing
that occurs in the boundary layers between diffuse and dense interstellar
clouds
C–H Bond Strengths and Acidities in Aromatic Systems: Effects of Nitrogen Incorporation in Mono-, Di-, and Triazines
The negative ion chemistry of five azine molecules has
been investigated
using the combined experimental techniques of negative ion photoelectron
spectroscopy to obtain electron affinities (EA) and tandem flowing
afterglow-selected ion tube (FA-SIFT) mass spectrometry to obtain
deprotonation enthalpies (Δ<sub>acid</sub><i>H</i><sub>298</sub>). The measured Δ<sub>acid</sub><i>H</i><sub>298</sub> for the most acidic site of each azine species is
combined with the EA of the corresponding radical in a thermochemical
cycle to determine the corresponding C–H bond dissociation
energy (BDE). The site-specific C–H BDE values of pyridine,
1,2-diazine, 1,3-diazine, 1,4-diazine, and 1,3,5-triazine are 110.4
± 2.0, 111.3 ± 0.7, 113.4 ± 0.7, 107.5 ± 0.4,
and 107.8 ± 0.7 kcal mol<sup>–1</sup>, respectively. The
application of complementary experimental methods, along with quantum
chemical calculations, to a series of nitrogen-substituted azines
sheds light on the influence of nitrogen atom substitution on the
strength of C–H bonds in six-membered rings