On the Structure of ZnI2{\rm ZnI_2}

A new structure for ${\rm ZnI_2}$ is proposed which it exists in tetragonal state. In this structure the ${\rm ZnI_2}$ molecule exists in a nonlinear array and forms the basis of the tetragonal unit cell with one basis per unit cell. The structural analysis based on the reflections listed in ASTM 30-1479 shows that the proposed structure is correct.Comment: six pages and four figures. Manuscript prepared in RevTe

Coulomb potentials in two and three dimensions under periodic boundary conditions

A method to sum over logarithmic potential in 2D and Coulomb potential in 3D with periodic boundary conditions in all directions is given. We consider the most general form of unit cells, the rhombic cell in 2D and the triclinic cell in 3D. For the 3D case, this paper presents a generalization of Sperb's work [R. Sperb, Mol. Simulation, \textbf{22}, 199-212(1999)]. The expressions derived in this work converge extremely fast in all region of the simulation cell. We also obtain results for slab geometry. Furthermore, self-energies for both 2D as well as 3D cases are derived. Our general formulas can be employed to obtain Madelung constants for periodic structures.Comment: Generalization of the work done in cond-mat/0405574. To appear in J. Chem. Physics. A few typos have been correcte

Effective way to sum over long range Coulomb potentials in two and three dimensions

I propose a method to calculate logarithmic interaction in two dimensions and coulomb interaction in three dimensions under periodic boundary conditions. This paper considers the case of a rectangular cell in two dimensions and an orthorhombic cell in three dimensions. Unlike the Ewald method, there is no parameter to be optimized, nor does it involve error functions, thus leading to the accuracy obtained. This method is similar in approach to that of Sperb [R. Sperb, Mol. Simulation, 22, 199 (1999).], but the derivation is considerably simpler and physically appealing. An important aspect of the proposed method is the faster convergence of the Green function for a particular case as compared to Sperb's work. The convergence of the sums for the most part of unit cell is exponential, and hence requires the calculation of only a few dozen terms. In a very simple way, we also obtain expressions for interaction for systems with slab geometries. Expressions for the Madelung constant of CsCl and NaCl are also obtained.Comment: To appear in Phy. Rev.

A tale of three kingdoms: Members of the Phylum Nematoda independently acquired the detoxifying enzyme cyanase through horizontal gene transfer from plants and bacteria

Horizontal gene transfer (HGT) has played an important role in the evolution of nematodes. Among candidate genes, cyanase, which is typically found only in plants, bacteria and fungi, is present in more than 35 members of the Phylum Nematoda, but absent from free-living and clade V organisms. Phylogenetic analyses showed that the cyanases of clade I organisms Trichinella spp., Trichuris spp. and Soboliphyme baturini (Subclass: Dorylaimia) represent a well-supported monophyletic clade with plant cyanases. In contrast, all cyanases found within the Subclass Chromadoria which encompasses filarioids, ascaridoids and strongyloids are homologous to those of bacteria. Western blots exhibited typical multimeric forms of the native molecule in protein extracts of Trichinella spiralis muscle larvae, where immunohisto- chemical staining localized the protein to the worm hypodermis and underlying muscle. Recombinant Trichinella cyanase was bioactive where gene transcription profiles support functional activity in vivo. Results suggest that: (1) independent HGT in parasitic nematodes originated from different Kingdoms; (2) cyanase acquired an active role in the biology of extant Trichinella; (3) acquisition occurred more than 400 million years ago (MYA), prior to the divergence of the Trichinellida and Dioctophymatida, and (4) early, free-living ances- tors of the genus Trichinella had an association with terrestrial plants

Mucus Transport in the Larger Airway Due to Prolonged Mild Cough: Effect of Serous Fluid and Cilia Beating

Since mucus production and transport is an important defense mechanism of the lower airways, this study focuses on this aspect. In this paper it is assumed that the co-axial flows of mucus and air is taking place in a circular tube representing a larger airway. In the central core, air is assumed to flow under quasi steady state turbulent condition and the mucus layer surrounding this central core is assumed to flow under unsteady laminar condition. The prolonged mild cough is represented by a time dependent pressure gradient function. To consider the effect of serous fluid, it has been assumed that the cilia bed is approximated by a porous matrix within which serous fluid flows following Darcy’s law. Further, the effect of cilia beating has been considered by assuming that a constant mean velocity which is a resultant of effective and recovery stroke is imparted on the serous fluid and this velocity is superimposed on the Darcy flow. For constant porosity of cilia bed and mucus viscosity, it is shown that air and mucus flow rates decrease with increase in serous fluid viscosity. The effect of porosity of cilia bed and cilia beating has been found to increase the air and mucus flow rates. Keywords Cilia Beating; Porous Matrix; Mucus Transport; Circular Model; Prolonged Mild Cough. MSC (2010) No.:76Z0