17 research outputs found
SI_Archive_S6
Full results of Orthofinder inferring orthologs between M. natalensis and D. melanogaster.
(OrthoFinder_OrthologousGroups_all_results_MNAT_DMEL.txt; Format: plain text)
Identified single copy orthologs (OrthoFinder) between M. natalensis and D. melanogaster.
(OrthoFinder_OrthologousGroups_single_copy_MNAT_DMEL.txt; Format: plain text
SI_Archive_S9
Masked multiple sequence alignment for tree inference.
AGO1-3/Piwi/Aub set (ALICUT_ago1-3-piwi-aub.ginsi.vsm.fas; FASTA format
SI_Archive_S4
Multiple Sequence Alignment of all CO1 sequences (M. natalensis and M. bellicosus)
(co1_m_bell_m_nat.aligned.fas; FASTA format)
Distance Matrix (Kimura corrected)
(aligned.distmat; Format: plain text
SI_Archive_S5
Complete raw read counts after HTSeq
(raw_counts.csv; Format: csv)
Complete normalized raw read counts after DESeq2
(normalized_counts_deseq2.csv; Format: csv
SI_Archive_S10
Checking Mnat_13309 to confirm identiy as Ago3 with M. bellicosus de novo data.
(1_checking_trin_mbel.txt; Format: plain text)
(2_trin_ago3_vs_dmel; Format: plain text)
(pfam_domains_ago3_contig.txt; Format: plain text)
(protocol.txt; Format: plain text)
(Trinity_contig.fa; FASTA-Format)
(workflow.docx; Format: MS Word
SI_Archive_S2
All Primers used for qRT-PCR
(Primers.txt; Format: plain text)
Transcriptome contigs used to find primers
(Contigs.fa; Format: fasta)
Expression Results of the qRT-PCR
(qRT-PCR.xlsx; Format: Excel-File
Molecular basis for the reproductive division of labour in a lower termite-5
<p><b>Copyright information:</b></p><p>Taken from "Molecular basis for the reproductive division of labour in a lower termite"</p><p>http://www.biomedcentral.com/1471-2164/8/198</p><p>BMC Genomics 2007;8():198-198.</p><p>Published online 28 Jun 2007</p><p>PMCID:PMC1988835.</p><p></p>bold line: cDNA strand; grey bar: open reading frame; numbers; II fragment; yellow bar: II fragment obtained from the first RDA; orange bar: II fragment obtained from the second RDA; turquoise bar: signal peptide; green bar: poly-adenylation-signal; red bar: poly-A-tail; asterisk: II restriction site; italic numbers: number of individual sequenced fragments
Molecular basis for the reproductive division of labour in a lower termite-0
<p><b>Copyright information:</b></p><p>Taken from "Molecular basis for the reproductive division of labour in a lower termite"</p><p>http://www.biomedcentral.com/1471-2164/8/198</p><p>BMC Genomics 2007;8():198-198.</p><p>Published online 28 Jun 2007</p><p>PMCID:PMC1988835.</p><p></p>Cloned inserts of randomly picked clones were PCR-amplified, denatured and dot-blotted onto two duplicate nylon transfer membranes and hybridized to radioactively labelled female neotenic (A) and worker (B) representations