24sites_lat_long

Geographic coordinates of the sampling location

dapc

Script to perform the DAPC analysi

filtered_2719neutral_snps.recode

Filtered .vcf file with 2,719 neutral SNP

popgraph

Script for generating the population grap

filtered_3699snps_californicus

Filtered dataset consisting of 3,699 SNPs genotyped in 717 giant California sea cucumber individual

strata.cucumbers.717ind

strata file with the population numbers used when converting VCF to other format

2719neutral_snps_noAK

Allele frequencies across neutral SNPs (excluding Alaska sites) used for spatial eigenfunction analysi

AEM_weight_all_vectors

AEM vectors used as input for RDA; edge weights used to compute AEM vectors are based on connectivity probabilities between site

dbMEM_straight_all_vectors

dbMEM vectors computed from Euclidean distances between sites used as input for RD

filtered_2719neutral_snps_genepop

2,719 neutral SNPs in genepop format for use in building the population grap