32 research outputs found
Fig2C_ITS_4cpdna
NEXUS and tre files with the analysis settings used in MrBayes inferred from the combined nuclear and chloroplast dataset (ITS, psbJ-petA, trnL-trnF, petB-petD, trnS-trnG) for Platycodonea
Fig2A_cpDNA_Platycodoneae
NEXUS and tre files with the analysis settings used in MrBayes inferred from the concatenated chloroplast dataset (psbJ-petA, trnL-trnF, petB-petD) for the Platycodonea
Nested-dating approach analysis
Script (.xml) and tre files for the "Nested analyses" of all three linked datasets: Platycodoneae, C. eminii and C. canariensi
Fig2B_ITS_platycodoneae
NEXUS and tre files with the analysis settings used in MrBayes inferred from the nuclear ribosomal dataset (ITS) for Platycodonea
Appendix 6 - Adjacency matrices through time
The time-stratified biogeographic model used for DEC analyses (time slices represent geological epochs or stages in the Cenozoic)
Appendix 8 - Bayesian paleoenvironmental model
Description of the Bayesian episodic environment-dependent birth-death model
Appendix 17 - BAMM analyses
Summary of diversification models in BAMM compared across a gradient of values for the Poison process governing the number of rate shifts