Additional file 2 of The genome of Rhizophagus clarus HR1 reveals a common genetic basis for auxotrophy among arbuscular mycorrhizal fungi

: Table S1. Homology search results for FAS genes. (XLSX 51 kb

Additional file 4 of The genome of Rhizophagus clarus HR1 reveals a common genetic basis for auxotrophy among arbuscular mycorrhizal fungi

: Table S3. KEGG pathways affected by genes missing in R. clarus and R. irregularis but present in other fungi. (XLSX 34 kb

Additional file 3 of The genome of Rhizophagus clarus HR1 reveals a common genetic basis for auxotrophy among arbuscular mycorrhizal fungi

: Table S2. MGCGs in R. clarus compared with other AM fungi. (XLSX 36 kb

Additional file 1 of The genome of Rhizophagus clarus HR1 reveals a common genetic basis for auxotrophy among arbuscular mycorrhizal fungi

: Figure S1. The k-mer (k = 31) content of R. clarus (left panel) and R. irregularis (right panel) obtained from HiSeq short-reads analyzed with Jellyfish [65]. Figure S2. Common missing pathways in two Rhizophagus species. Figure S3. Pathways in vitamin B6 metabolism. Figure S4. Fermentation pathways converting pyrvate into lactate, formate and acetate, which causes cytosolic acidification. (DOCX 1385 kb

Additional file 5 of The genome of Rhizophagus clarus HR1 reveals a common genetic basis for auxotrophy among arbuscular mycorrhizal fungi

: Table S4. The presence of notable KEGG metabolic enzymes in 20 fungal species assessed by GhostKOALA. (XLSX 24 kb