11 research outputs found
Annual report 2015
Accessions considered in the study. Overview of the material considered in this study. For all materials, the GenBank identifier, the accession and species name as used in this study (Species) as well as their species synonyms used in the donor seed banks or in the NCBI GenBank (Material source/Reference) are provided. The genome symbol, and the country of origin, where the material was originally collected are given. The ploidy level measured in the scope of this study and the information if a herbarium voucher could be deposited in the herbarium of IPK Gatersleben (GAT) is given. Genomic formulas of tetraploids and hexploids are given as âfemale x male parentâ. The genomes of Aegilops taxa follow Kilian et al. [74] and Li et al. [84]. Genome denominations for Hordeum follow Blattner [107] and Bernhardt [12] for the remaining taxa. (XLS 84Â kb
BCA output from BUCKy
Concordance file obtained from BUCKy on 12 loci (raw data Fig. S15
Table S1 Individuals included in the study and number of reads per locus
Table S1 Individuals included in the study and number of reads per locu
matK all individuals Tree
Tree locus matK (raw tree for Fig. S14
matK all individuals Matrix
Matrix locus matK (data for Fig. S14
Supplementary Information
Supplementary Information containing annotated trees (Figs. S2-S17, S19), figures S1 and S18, tables S1 and S2 and references
*BEAST species tree
*BEAST output (TreeAnnotator) from three identical analyses combined with LogCombiner (raw tree Fig. 2
26 loci supermatrix
Matrix including all loci from this study and Petersen et al. 2011 for one individual per diploid species (data for Fig. S17
26 loci supermatrix Tree
Tree inferred from all loci from this study and Petersen et al. 2011 with one individual per diploid species (raw tree Fig. S17