Comparison of various methods for estimating the mean growing season percent photosynthetic photon flux density in forests

Five methods for estimating the mean growing season percent photosynthetic photon flux density (PPFD) were compared to continuous measurements of PPFD throughout the growing season within a young bigleaf maple stand on Vancouver Island (Canada). Measured PPFD was recorded continuously as 10-min averages over the growing season (May 18-October 14, 1996) using 52 gallium arsenide phosphide photodiodes in the understory and a LI-COR quantum sensor (LI-190SA) in the open. Photodiodes were randomly located on a systematic grid of points and represented a wide range of above canopy openings which were classified into three different types of light environments: closed canopy, gaps of various sizes, and open canopy. Objectives of this study were to compare different methods for estimating the growing season %PPFD and to determine the efficiency of these methods in the three light environments. At each photodiode location, instantaneous light measurements using a Ceptometer on sunny days around noon and a LAI-2000 Plant Canopy Analyzer were made and hemispherical canopy photographs were taken. 10-min averages recorded by the photodiodes during completely overcast sky conditions were used as surrogate values for a method that uses instantaneous measurements on overcast days. Finally, a new light model (LITE) developed to estimate growing season %PPFD in a deciduous canopy was tested. All these five methods provided estimates of growing season %PPFD and are much less time consuming than continuous measurements of %PPFD using photodiodes. The three most accurate (r2>0.89) methods to estimate the growing season %PPFD were the 10 min averages on overcast days, the diffuse non-interceptance calculated using the LAI-2000, and the gap light index (GLI) calculated from the hemispherical canopy photographs. These three methods performed similarly in each type of light environment. Although the relationship between the LITE model and the growing season %PPFD was good (r2=0.79), the model systematically underestimated light transmission. The instantaneous sunny days around noon method was the least efficient method (r2=0.68) for estimating the growing season %PPFD, although replacing instantaneous measures with the mean of two 10-min averages improved r2 to 0.84. Estimates on sunny days tended to be low in low light and high in high light. Practical considerations such as equipment availability, cost, sampling and processing time, sky conditions, and the number of microsites to be sampled should be taken into account in the selection of the suitable method for a particular study

Temporal variations in the understory photosynthetic photon flux density of deciduous stand: the effects of canopy development, solar elevation, and sky conditions

The effects of canopy development, solar elevation, and sky conditions on temporal variation in photosynthetic photon flux density (PPFD) were examined within a 9-year-old bigleaf maple stand on Vancouver Island (Canada). PPFD was measured every second and stored as 10-min averages from 18 May to 14 October 1996, at 52 microsites characterised according to their growing season %PPFD (GSP). PPFD and %PPFD variability was examined at three different temporal levels. Specific days in May, July, and September with clear and overcast sky conditions were selected to separate the effects of canopy development and solar elevation on diurnal and seasonal light variability. \ud Diurnal light variability expressed as the mean of the difference between two consecutive 10-min averages of PPFD and %PPFD decreased with increasing GSP on clear days in May. For clear days in July and September, variability was characterised by arc-shaped relationships with high variability for microsites receiving between 20 and 80% GSP and lower variability for microsites below 20 and above 80% GSP. On overcast days, diurnal variability in PPFD increased with increasing GSP while diurnal variability in %PPFD showed an arc-shape relationship. The coefficient of variation of PPFD and %PPFD decreased with increasing GSP on clear days and sunflecks decreased with decreasing GSP and from May to September. \ud Day-to-day light variability expressed as the mean difference between consecutive daily PPFD increased with increasing GSP while the mean difference between consecutive daily %PPFD was higher for microsites receiving between 20 and 80% GSP. The coefficient of variation for the daily PPFD and %PPFD was higher for microsites receiving <20% GSP compared to other microsites. Seasonal light variability showed that microsites with <50% GSP received up to eight times more light in May than in July on both clear and overcast sky conditions because of canopy development. From July to September in clear sky conditions, decrease in light was variable for microsites receiving <40% GSP; probably because of the position of microsites in relation to the solar track. On overcast days, mean daily PPFD above canopy and in the understorey was 2 to 3 times higher in July than in September while mean daily %PPFD remained stable. The possible effects of the types of diurnal and day-to-day light variability on physiological and morphological responses of understorey plants are discussed

Predicting and managing light in the understory of boreal forests

This paper reviews current information relating to the dynamics of light in northern and boreal forests and discusses factors affecting overstory light transmission, seasonality of light, sunflecks, canopy gaps, and understory development, particularly with regard to tree regeneration. Techniques for measurement of light in forests such as radiometers, photosensitive paper or chemicals, hemispherical canopy photographs, the plant canopy analyzer, or visual estimators of canopy density are each discussed in terms of their accuracy, costs, ease of use, and conditions required during measurement. Predictive models of light transmission based on canopy architecture are also described in terms of their assumptions, accuracy, and input data costs. Lastly the paper discusses the relationship among overstory and understory densities, ground-level light, and 'windows of opportunity' for regeneration of trees in the understory following management interventions

Alternative use of artificial quarry lakes as a source of thermal energy for greenhouses

In northern Italy, most greenhouses rely on gas or oil heaters which are sometimes subject to high operating costs. Several greenhouses are nearby quarry lakes, which are the legacy of the expansion of cities in the last decades, including Turin (NW Italy). About 20 quarry lakes were excavated close to the Po riverbed in the southern part of this urban area, along a belt of more than 30 km in length, with an overall volume exceeding 10 million m3 water. The study addresses these artificial lakes as a low enthalpy thermal energy source, potentially providing heat to surrounding agri-business buildings. Detailed temperature monitoring of a large lake quarry was conducted over two years at different depths, measuring the surrounding groundwater level as well. Two different behaviors of the lake during the winter and summer seasons enabled the definition of a quite low water mixing process between the surrounding aquifers and the lake (in the range of 2–4◦ C). An evaluation of the heat extraction potential using the lake as a heat source, depending on water temperature and its volume, and a qualitative comparison with groundwater systems are proposed. This study contributes to increasing knowledge on an overlooked resource for sustainable heating

The Role of Probiotics in Acne and Rosacea

Through basic science as well as animal and human clinical trials, the evidence is growing for the use of probiotics in the treatment of acne. Acne formation is dependent upon several processes, including follicular hyperkeratinization, excess sebum production, Propionibacterium acnes colonization and an inflammatory cascade. The antimicrobial properties of probiotics as well as the modification of the skin microbiome may decrease levels of P. acnes on the skin. Additionally, successful acne outcomes are influenced by compliance with topical regimens, which can commonly cause skin barrier disruption, leading to dryness and irritation. Consequently, calming inflammation as well as maintaining skin hydration and barrier repair is of primary importance when treating acne. In this chapter, we discuss how probiotics affect several factors in the pathophysiology of acne development and can improve the treatment outcomes

Functional Annotation of the Ophiostoma novo-ulmi Genome: Insights into the Phytopathogenicity of the Fungal Agent of Dutch Elm Disease

International audienceThe ascomycete fungus Ophiostoma novo-ulmi is responsible for the pandemic of Dutch elm disease that has been ravaging Europe and North America for 50 years. We proceeded to annotate the genome of the O. novo-ulmi strain H327 that was sequenced in 2012. The 31.784-Mb nuclear genome (50.1% GC) is organized into 8 chromosomes containing a total of 8,640 protein-coding genes that we validated with RNA sequencing analysis. Approximately 53% of these genes have their closest match to Grosmannia clavigera kw1407, followed by 36% in other close Sordariomycetes, 5% in other Pezizomycotina, and surprisingly few (5%) orphans. A relatively small portion (~3.4%) of the genome is occupied by repeat sequences; however, the mechanism of repeat-induced point mutation appears active in this genome. Approximately 76% of the proteins could be assigned functions using Gene Ontology analysis; we identified 311 carbohydrate-active enzymes, 48 cytochrome P450s, and 1,731 proteins potentially involved in pathogen– host interaction, along with 7 clusters of fungal secondary metabolites. Complementary mating-type locus sequencing, mating tests, and culturing in the presence of elm terpenes were conducted. Our analysis identified a specific genetic arsenal impacting the sexual and vegetative growth, phytopathogenicity, and signaling/plant–defense–degradation relationship between O. novo-ulmi and its elm host and insect vectors. Introduction During the last centuries, increased movements of people and goods across countries and continents have favored the emergence and global spread of plant pathogens, insect pests, and invasive weeds which have substantially altered the landscape of several parts of the world. One well-documented example is Dutch elm disease (DED), the most destructive disease of elms. It has been estimated that over 1 billion mature elms were killed by two successive pandemics since the early 1900s (Paoletti et al. 2005). The first pandemic, which prompted initial investigations by Dutch scientists shortly after the First World War (Holmes and Heybroek 1990), was caused by the ascomycete fungus Ophiostoma ulmi (Buisman) Nannf. As it spread relentlessly over Western Europe and, a few decade

Divergent cytotoxic and metabolically stimulative functions of sigma-2 receptors: Structure-Activity Relationships of 6-Acetyl-3-(4-(4-(4-fluorophenyl)piperazin-1-yl)butyl)benzo[d]oxazol-2(3H)-one (SN79) Derivatives

© 2019 by the authors. Astragalus is a very interesting plant genus, well-known for its content of flavonoids, triterpenes and polysaccharides. Its secondary metabolites are described as biologically active compounds showing several activities, e.g., immunomodulating, antibacterial, antiviral and hepatoprotective. This inspired us to analyze the Bulgarian endemic A. aitosensis (Ivanisch.) to obtain deeper information about its phenolic components. We used extensive chromatographic separation of A. aitosensis extract to obtain seven phenolic compounds (1–7), which were identified using combined LC-MS and NMR spectral studies. The 1D and 2D NMR analyses and HR-MS allowed us to resolve the structures of known compounds 5–7 as isorhamnetin-3-O-robinobioside, isorhamnetin-3-O-(2,6-di-O-α-rhamno-pyranosyl-β-galactopyranoside), and alangiflavoside, respectively, and further comparison of these spectral data with available literature helped us with structural analysis of newly described flavonoid glycosides 1–4. These were described in plant source for the first time