Intrinsic speckle noise in in-line particle holography due to poly-disperse and continuous particle sizes

In-line particle holography is subject to image deterioration due to intrinsic speckle noise. The resulting reduction in the signal to noise ratio (SNR) of the replayed image can become critical for applications such as holographic particle velocimetry (HPV) and 3D visualisation of marine plankton. Work has been done to extend the mono-disperse model relevant to HPV to include poly-disperse particle fields appropriate for the visualisation of marine plankton. Continuous and discrete particle fields are both considered. It is found that random walk statistics still apply for the poly-disperse case. The speckle field is simply the summation of the individual speckle patterns due to each scatter size. Therefore the characteristic speckle parameter (which encompasses particle diameter, concentration and sample depth) is also just the summation of the individual spedde parameters. This reduces the SNR calculation to the same form as for the mono-disperse case. For the continuous situation three distributions, power, exponential and Gaussian are discussed with the resulting SNR calculated. The work presented here was performed as part of the Holomar project to produce a working underwater holographic camera for recording plankton

Visual kinematic force estimation in robot-assisted surgery – application to knot tying

Robot-assisted surgery has potential advantages but lacks force feedback, which can lead to errors such as broken stitches or tissue damage. More experienced surgeons can judge the tool-tissue forces visually and an automated way of capturing this skill is desirable. Methods to measure force tend to involve complex measurement devices or visual tracking of tissue deformation. We investigate whether surgical forces can be estimated simply from the discrepancy between kinematic and visual measurement of the tool position. We show that combined visual and kinematic force estimation can be achieved without external measurements or modelling of tissue deformation. After initial alignment when no force is applied to the tool, visual and kinematic estimates of tool position diverge under force. We plot visual/kinematic displacement with force using vision and marker-based tracking. We demonstrate the ability to discern the forces involved in knot tying and visualize the displacement force using the publicly available JIGSAWS dataset as well as clinical examples of knot tying with the da Vinci surgical system. The ability to visualize or feel forces using this method may offer an advantage to those learning robotic surgery as well as adding to the information available to more experienced surgeons

Scenario dependence of linear site-effect factors for short-period response spectral ordinates

Ground‐motion models for response spectral ordinates commonly partition site‐response effects into linear and nonlinear components. The nonlinear components depend upon the earthquake scenario being considered implicitly through the use of the expected level of excitation at some reference horizon. The linear components are always assumed to be independent of the earthquake scenario. This article presents empirical and numerical evidence as well as a theoretical explanation for why the linear component of site response depends upon the magnitude and distance of the earthquake scenario. Although the impact is most pronounced for small‐magnitude scenarios, the finding has significant implications for a number of applications of more general interest including the development of site‐response terms within ground‐motion models, the estimation of ground‐motion variability components ϕS2SϕS2S and ϕSSϕSS , the construction of partially nonergodic models for site‐specific hazard assessments, and the validity of the convolution approach for computing surface hazard curves from those at a reference horizon, among others. All of these implications are discussed in the present article

Tracing coco de mer's reproductive history: Pollen and nutrient limitations reduce fecundity

This is the final version of the article. Available from Wiley Open Access via the DOI in this record.Habitat degradation can reduce or even prevent the reproduction of previously abundant plant species. To develop appropriate management strategies, we need to understand the reasons for reduced recruitment in degraded ecosystems. The dioecious coco de mer palm (Lodoicea maldivica) produces by far the largest seeds of any plant. It is a keystone species in an ancient palm forest that occurs only on two small islands in the Seychelles, yet contemporary rates of seed production are low, especially in fragmented populations. We developed a method to infer the recent reproductive history of female trees from morphological evidence present on their inflorescences. We then applied this method to investigate the effects of habitat disturbance and soil nutrient conditions on flower and fruit production. The 57 female trees in our sample showed a 19.5-fold variation in flower production among individuals over a seven-year period. Only 77.2% of trees bore developing fruits (or had recently shed fruits), with the number per tree ranging from zero to 43. Flower production was positively correlated with concentrations of available soil nitrogen and potassium and did not differ significantly between closed and degraded habitat. Fruiting success was positively correlated with pollen availability, as measured by numbers and distance of neighboring male trees. Fruit set was lower in degraded habitat than in closed forest, while the proportion of abnormal fruits that failed to develop was higher in degraded habitat. Seed size recorded for a large sample of seeds collected by forest wardens varied widely, with fresh weights ranging from 1 to 18 kg. Synthesis: Shortages of both nutrients and pollen appear to limit seed production of Lodoicea in its natural habitat, with these factors affecting different stages of the reproductive process. Flower production varies widely amongst trees, while seed production is especially low in degraded habitat. The size of seeds is also very variable. We discuss the implications of these findings for managing this ecologically and economically important species.Deutsche Forschungsgemeinschaft. Grant Number: KA 3349/2‐1. Eidgenössische Technische Hochschule Zürich. Grant Number: ETH‐37 12‐

Evolution of leaf-form in land plants linked to atmospheric CO2 decline in the Late Palaeozoic era

The widespread appearance of megaphyll leaves, with their branched veins and planate form, did not occur until the close of the Devonian period at about 360 Myr ago. This happened about 40 Myr after simple leafless vascular plants first colonized the land in the Late Silurian/Early Devonian, but the reason for the slow emergence of this common feature of present-day plants is presently unresolved. Here we show, in a series of quantitative analyses using fossil leaf characters and biophysical principles, that the delay was causally linked with a 90% drop in atmospheric pCO2 during the Late Palaeozoic era. In contrast to simulations for a typical Early Devonian land plant, possessing few stomata on leafless stems, those for a planate leaf with the same stomatal characteristics indicate that it would have suffered lethal overheating, because of greater interception of solar energy and low transpiration. When planate leaves first appeared in the Late Devonian and subsequently diversified in the Carboniferous period, they possessed substantially higher stomatal densities. This observation is consistent with the effects of the pCO2 on stomatal development and suggests that the evolution of planate leaves could only have occurred after an increase in stomatal density, allowing higher transpiration rates that were sufficient to maintain cool and viable leaf temperatures

Knowledge sharing in infection prevention in routine and outbreak situations: a survey of the Society for Healthcare Epidemiology of America Research Network

Abstract In this cross-sectional Society for Healthcare Epidemiology of America Research Network survey on knowledge sharing in infection prevention we identified a rudimentary understanding of how to communicate and share knowledge within healthcare institutions. Our data support the need of further research in this important field