4 research outputs found
Rowan University\u27s converted triples: impacts on roommate relationships and fostering social density
The primary purpose of this study was to explore selected freshmen students that were assigned to triple rooms for the 2014-2015 academic year and see how a student\u27s assignment to a triple room impacted his or her roommate relationships and possibly led to the fostering of social density. The students were incoming freshmen in the class of 2018 living in Evergreen, Oak, or Laurel Halls and were either general freshmen or freshmen students participating in the Engineering Learning Community. At the end of the fall 2014 semester freshmen students assigned to quad, triple, double, and single rooms were surveyed to give feedback regarding their experiences living in their particular residential space with or without roommates. There was particular interest to see if the tripled rooms on Rowan University\u27s campus for this upcoming year, the 32 rooms within Oak, 31 rooms within Laurel, and the 118 rooms within Evergreen Hall, fostered social density and impacted a student\u27s roommate relationships compared to freshmen students living in quad, double, or single rooms in Evergreen, Oak, or Laurel Hall. Subjects reported that they were satisfied and having a positive experience with their residential environment and roommate(s). Furthermore, they reported that they did not feel their residential environment was overcrowded or socially dense. Overall, students in double and triple rooms stated they were very satisfied or satisfied with their current residential environment and the roommate relationship(s) they had built and maintained
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Minnesota peat viromes reveal terrestrial and aquatic niche partitioning for local and global viral populations.
BackgroundPeatlands are expected to experience sustained yet fluctuating higher temperatures due to climate change, leading to increased microbial activity and greenhouse gas emissions. Despite mounting evidence for viral contributions to these processes in peatlands underlain with permafrost, little is known about viruses in other peatlands. More generally, soil viral biogeography and its potential drivers are poorly understood at both local and global scales. Here, 87 metagenomes and five viral size-fraction metagenomes (viromes) from a boreal peatland in northern Minnesota (the SPRUCE whole-ecosystem warming experiment and surrounding bog) were analyzed for dsDNA viral community ecological patterns, and the recovered viral populations (vOTUs) were compared with our curated PIGEON database of 266,125 vOTUs from diverse ecosystems.ResultsWithin the SPRUCE experiment, viral community composition was significantly correlated with peat depth, water content, and carbon chemistry, including CH4 and CO2 concentrations, but not with temperature during the first 2 years of warming treatments. Peat vOTUs with aquatic-like signatures (shared predicted protein content with marine and/or freshwater vOTUs) were significantly enriched in more waterlogged surface peat depths. Predicted host ranges for SPRUCE vOTUs were relatively narrow, generally within a single bacterial genus. Of the 4326 SPRUCE vOTUs, 164 were previously detected in other soils, mostly peatlands. None of the previously identified 202,371 marine and freshwater vOTUs in our PIGEON database were detected in SPRUCE peat, but 0.4% of 80,714 viral clusters (VCs, grouped by predicted protein content) were shared between soil and aquatic environments. On a per-sample basis, vOTU recovery was 32 times higher from viromes compared with total metagenomes.ConclusionsResults suggest strong viral "species" boundaries between terrestrial and aquatic ecosystems and to some extent between peat and other soils, with differences less pronounced at higher taxonomic levels. The significant enrichment of aquatic-like vOTUs in more waterlogged peat suggests that viruses may also exhibit niche partitioning on more local scales. These patterns are presumably driven in part by host ecology, consistent with the predicted narrow host ranges. Although more samples and increased sequencing depth improved vOTU recovery from total metagenomes, the substantially higher per-sample vOTU recovery after viral particle enrichment highlights the utility of soil viromics. Video abstract The importance of Minnesota peat viromes in revealing terrestrial and aquatic niche partitioning for viral populations
BioTIME:a database of biodiversity time series for the Anthropocene
Abstract
Motivation: The BioTIME database contains raw data on species identities and abundances in ecological assemblages through time. These data enable users to calculate temporal trends in biodiversity within and amongst assemblages using a broad range of metrics. BioTIME is being developed as a community‐led open‐source database of biodiversity time series. Our goal is to accelerate and facilitate quantitative analysis of temporal patterns of biodiversity in the Anthropocene.
Main types of variables included: The database contains 8,777,413 species abundance records, from assemblages consistently sampled for a minimum of 2 years, which need not necessarily be consecutive. In addition, the database contains metadata relating to sampling methodology and contextual information about each record.
Spatial location and grain: BioTIME is a global database of 547,161 unique sampling locations spanning the marine, freshwater and terrestrial realms. Grain size varies across datasets from 0.0000000158 km² (158 cm²) to 100 km² (1,000,000,000,000 cm²).
Time period and grain: BioTIME records span from 1874 to 2016. The minimal temporal grain across all datasets in BioTIME is a year.
Major taxa and level of measurement: BioTIME includes data from 44,440 species across the plant and animal kingdoms, ranging from plants, plankton and terrestrial invertebrates to small and large vertebrates.
Software format: .csv and .SQL