20 research outputs found
Scripts for ABC analysis
Custom-made scripts used in the ABC analysis with ABCtoolbox/fastsimcoal
Input files for ABC analysis
Input files used for ABC analysis with ABCtoolbox/fastsimcoal
Summary statistics for ABC analysis
Text files containing summary statistics used in the ABC analysis
Supporting Figure S6
Supporting Figure S6: Distribution of nucleotide diversity (Ď€, panel A), genealogical sorting index (gsi, panel B), depth of the lowest common ancestor of all four flycatcher species relative to the root depth (panel C), frequencies of all 15 possible rooted tree topologies (panel D), and topology diversity index (tdi, panel E) for all chromosomes
Supporting Table S1
Supporting Table S1: List of all flycatcher samples used in the study
Data Files
Contains input files for different species tree analyses and phylogenetic trees
Supporting Information_Tables S2-S4_Figures S1-S5
Contains Supporting Tables S2-S4 and Supporting Figures S1-S
All data
This folder contains the information related to the analyses as well as the important results and scripts.
Folders are described in individual README within the subfolders